Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 PCDHB17P-202ENST00000623466 3066 ntBASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 FP325330.2-201ENST00000624219 5630 ntBASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01558Q9Y6Z2 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 AC006277.1-201ENST00000624348 1610 ntBASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 AC023024.2-201ENST00000623561 1993 ntBASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
LINC01558Q9Y6Z2 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms