Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTCH2Q9Y6C5 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTCH2Q9Y6C5 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTCH2Q9Y6C5 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.82■□□□□ 0.44
PTCH2Q9Y6C5 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.82■□□□□ 0.44
PTCH2Q9Y6C5 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.82■□□□□ 0.44
PTCH2Q9Y6C5 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCH2Q9Y6C5 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PTCH2Q9Y6C5 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PTCH2Q9Y6C5 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTCH2Q9Y6C5 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTCH2Q9Y6C5 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PTCH2Q9Y6C5 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCH2Q9Y6C5 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCH2Q9Y6C5 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PTCH2Q9Y6C5 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCH2Q9Y6C5 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTCH2Q9Y6C5 HSPB1P2-201ENST00000448722 546 ntBASIC17.81■□□□□ 0.44
PTCH2Q9Y6C5 KRT18P25-201ENST00000508931 1278 ntBASIC17.81■□□□□ 0.44
PTCH2Q9Y6C5 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.81■□□□□ 0.44
PTCH2Q9Y6C5 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.81■□□□□ 0.44
PTCH2Q9Y6C5 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.81■□□□□ 0.44
PTCH2Q9Y6C5 FGFR3P5-201ENST00000564496 886 ntBASIC17.81■□□□□ 0.44
PTCH2Q9Y6C5 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC17.81■□□□□ 0.44
PTCH2Q9Y6C5 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.81■□□□□ 0.44
PTCH2Q9Y6C5 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.81■□□□□ 0.44
PTCH2Q9Y6C5 AL121723.1-201ENST00000445194 1519 ntBASIC17.81■□□□□ 0.44
PTCH2Q9Y6C5 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCH2Q9Y6C5 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PTCH2Q9Y6C5 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.81■□□□□ 0.44
PTCH2Q9Y6C5 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTCH2Q9Y6C5 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PTCH2Q9Y6C5 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
PTCH2Q9Y6C5 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 AC008267.1-201ENST00000474858 1069 ntBASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 COX5BP1-201ENST00000507622 393 ntBASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 AC134698.3-201ENST00000523880 214 ntBASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 MIR3907-201ENST00000579424 151 ntBASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 AP005019.2-201ENST00000615104 511 ntBASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTCH2Q9Y6C5 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 NKAIN1P1-201ENST00000435754 582 ntBASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 KRT18P43-201ENST00000469825 1281 ntBASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 AC138649.2-201ENST00000615886 705 ntBASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTCH2Q9Y6C5 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTCH2Q9Y6C5 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCH2Q9Y6C5 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms