Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.71□□□□□ -0.06
PCDHGB1Q9Y5G3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
PCDHGB1Q9Y5G3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCDHGB1Q9Y5G3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.71□□□□□ -0.06
PCDHGB1Q9Y5G3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCDHGB1Q9Y5G3 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.71□□□□□ -0.06
PCDHGB1Q9Y5G3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
PCDHGB1Q9Y5G3 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.71□□□□□ -0.06
PCDHGB1Q9Y5G3 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.71□□□□□ -0.06
PCDHGB1Q9Y5G3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
PCDHGB1Q9Y5G3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCDHGB1Q9Y5G3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.71□□□□□ -0.06
PCDHGB1Q9Y5G3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 KRT18P13-201ENST00000400056 1290 ntBASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 AL590627.1-203ENST00000421194 1026 ntBASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 NKAPP1-205ENST00000585790 367 ntBASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 SLC22A20-204ENST00000530038 1673 ntBASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDHGB1Q9Y5G3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 U82695.1-201ENST00000635752 1889 ntBASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 OR2I1P-209ENST00000641730 5365 ntBASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 AC132008.2-207ENST00000454517 770 ntBASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.69□□□□□ -0.06
PCDHGB1Q9Y5G3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms