Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 C1QBPP1-201ENST00000400117 770 ntBASIC16.55■□□□□ 0.24
YIPF1Q9Y548 BOLA2P3-201ENST00000404566 256 ntBASIC16.55■□□□□ 0.24
YIPF1Q9Y548 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 ACTG1P3-201ENST00000431775 1114 ntBASIC16.55■□□□□ 0.24
YIPF1Q9Y548 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 MIR4259-201ENST00000584466 101 ntBASIC16.55■□□□□ 0.24
YIPF1Q9Y548 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.55■□□□□ 0.24
YIPF1Q9Y548 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 AL596087.1-201ENST00000400979 1969 ntBASIC16.55■□□□□ 0.24
YIPF1Q9Y548 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
YIPF1Q9Y548 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 ANKRD19P-201ENST00000338192 862 ntBASIC16.54■□□□□ 0.24
YIPF1Q9Y548 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 SLC25A47P1-201ENST00000531577 414 ntBASIC16.54■□□□□ 0.24
YIPF1Q9Y548 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 MIR6775-201ENST00000617557 69 ntBASIC16.54■□□□□ 0.24
YIPF1Q9Y548 MTHFR-217ENST00000641820 1569 ntBASIC16.54■□□□□ 0.24
YIPF1Q9Y548 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 AL662844.4-201ENST00000606367 2838 ntBASIC16.54■□□□□ 0.24
YIPF1Q9Y548 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.54■□□□□ 0.24
YIPF1Q9Y548 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 HLA-V-201ENST00000429037 534 ntBASIC16.53■□□□□ 0.24
YIPF1Q9Y548 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 KRT223P-202ENST00000449164 1292 ntBASIC16.53■□□□□ 0.24
YIPF1Q9Y548 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.53■□□□□ 0.24
YIPF1Q9Y548 ENPP7P5-201ENST00000541031 1031 ntBASIC16.53■□□□□ 0.24
YIPF1Q9Y548 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms