Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP25Q9UHP3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP25Q9UHP3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
USP25Q9UHP3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC18.35■□□□□ 0.53
USP25Q9UHP3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP25Q9UHP3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
USP25Q9UHP3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC18.35■□□□□ 0.53
USP25Q9UHP3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.35■□□□□ 0.53
USP25Q9UHP3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP25Q9UHP3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP25Q9UHP3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP25Q9UHP3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.35■□□□□ 0.53
USP25Q9UHP3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.35■□□□□ 0.53
USP25Q9UHP3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP25Q9UHP3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP25Q9UHP3 AC025580.3-201ENST00000617932 1424 ntBASIC18.35■□□□□ 0.53
USP25Q9UHP3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP25Q9UHP3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP25Q9UHP3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.35■□□□□ 0.53
USP25Q9UHP3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP25Q9UHP3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.35■□□□□ 0.53
USP25Q9UHP3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP25Q9UHP3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.35■□□□□ 0.53
USP25Q9UHP3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP25Q9UHP3 AC091951.1-201ENST00000512854 2465 ntBASIC18.35■□□□□ 0.53
USP25Q9UHP3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC18.35■□□□□ 0.53
USP25Q9UHP3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.35■□□□□ 0.53
USP25Q9UHP3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP25Q9UHP3 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.35■□□□□ 0.53
USP25Q9UHP3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP25Q9UHP3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP25Q9UHP3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
USP25Q9UHP3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.35■□□□□ 0.53
USP25Q9UHP3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC18.35■□□□□ 0.53
USP25Q9UHP3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP25Q9UHP3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.34■□□□□ 0.53
USP25Q9UHP3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC18.34■□□□□ 0.53
USP25Q9UHP3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP25Q9UHP3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP25Q9UHP3 AC139749.1-202ENST00000617529 3139 ntBASIC18.34■□□□□ 0.53
USP25Q9UHP3 AL359258.3-201ENST00000622910 2331 ntBASIC18.34■□□□□ 0.53
USP25Q9UHP3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
USP25Q9UHP3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP25Q9UHP3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.34■□□□□ 0.53
USP25Q9UHP3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP25Q9UHP3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP25Q9UHP3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC18.34■□□□□ 0.53
USP25Q9UHP3 BCAR1-209ENST00000546196 1340 ntBASIC18.34■□□□□ 0.53
USP25Q9UHP3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
USP25Q9UHP3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP25Q9UHP3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP25Q9UHP3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.34■□□□□ 0.53
USP25Q9UHP3 HAUS4P1-201ENST00000406739 1145 ntBASIC18.34■□□□□ 0.53
USP25Q9UHP3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.34■□□□□ 0.53
USP25Q9UHP3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.34■□□□□ 0.53
USP25Q9UHP3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
USP25Q9UHP3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
USP25Q9UHP3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
USP25Q9UHP3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.34■□□□□ 0.53
USP25Q9UHP3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.34■□□□□ 0.53
USP25Q9UHP3 KRT19P2-202ENST00000557173 1012 ntBASIC18.34■□□□□ 0.53
USP25Q9UHP3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.34■□□□□ 0.53
USP25Q9UHP3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP25Q9UHP3 AC064836.3-201ENST00000607928 673 ntBASIC18.34■□□□□ 0.53
USP25Q9UHP3 AL161645.1-201ENST00000622716 1255 ntBASIC18.34■□□□□ 0.53
USP25Q9UHP3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP25Q9UHP3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP25Q9UHP3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
USP25Q9UHP3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP25Q9UHP3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
USP25Q9UHP3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
USP25Q9UHP3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC18.34■□□□□ 0.53
USP25Q9UHP3 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.34■□□□□ 0.53
USP25Q9UHP3 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP25Q9UHP3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
USP25Q9UHP3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
USP25Q9UHP3 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.34■□□□□ 0.53
USP25Q9UHP3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP25Q9UHP3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP25Q9UHP3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP25Q9UHP3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP25Q9UHP3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP25Q9UHP3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP25Q9UHP3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP25Q9UHP3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
USP25Q9UHP3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP25Q9UHP3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP25Q9UHP3 NFIC-211ENST00000641145 8399 ntBASIC18.33■□□□□ 0.53
USP25Q9UHP3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
USP25Q9UHP3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.33■□□□□ 0.53
USP25Q9UHP3 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP25Q9UHP3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
USP25Q9UHP3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP25Q9UHP3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP25Q9UHP3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
USP25Q9UHP3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.33■□□□□ 0.53
USP25Q9UHP3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP25Q9UHP3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
USP25Q9UHP3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
USP25Q9UHP3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms