Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.44■□□□□ 0.22
HCFC1R1Q9NWW0 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.44■□□□□ 0.22
HCFC1R1Q9NWW0 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.44■□□□□ 0.22
HCFC1R1Q9NWW0 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
HCFC1R1Q9NWW0 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
HCFC1R1Q9NWW0 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.44■□□□□ 0.22
HCFC1R1Q9NWW0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HCFC1R1Q9NWW0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 FO681548.1-201ENST00000455617 1132 ntBASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 KRT18P43-201ENST00000469825 1281 ntBASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 AP000812.2-201ENST00000538934 718 ntBASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 AP001063.1-201ENST00000568332 529 ntBASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 AC009486.1-201ENST00000569860 813 ntBASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 AC000095.1-201ENST00000603208 874 ntBASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 AC092364.2-201ENST00000596710 2692 ntBASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HCFC1R1Q9NWW0 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 BRWD1P1-201ENST00000401091 371 ntBASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 FAM21FP-201ENST00000426241 1131 ntBASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 AL355994.2-201ENST00000447882 704 ntBASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 RNA5SP412-201ENST00000516234 123 ntBASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 AL606495.2-201ENST00000605867 535 ntBASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 MIR6869-201ENST00000619434 62 ntBASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 TUBB1P2-201ENST00000422712 1306 ntBASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 TUBB1P1-201ENST00000503144 1300 ntBASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1R1Q9NWW0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCFC1R1Q9NWW0 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms