Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC010336.2-201ENST00000564226 506 ntBASIC16.99■□□□□ 0.31
CISHQ9NSE2 AC005498.2-205ENST00000593218 784 ntBASIC16.99■□□□□ 0.31
CISHQ9NSE2 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
CISHQ9NSE2 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.99■□□□□ 0.31
CISHQ9NSE2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.99■□□□□ 0.31
CISHQ9NSE2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CISHQ9NSE2 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
CISHQ9NSE2 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
CISHQ9NSE2 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CISHQ9NSE2 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.99■□□□□ 0.31
CISHQ9NSE2 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CISHQ9NSE2 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CISHQ9NSE2 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CISHQ9NSE2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CISHQ9NSE2 CICP13-201ENST00000422015 2789 ntBASIC16.99■□□□□ 0.31
CISHQ9NSE2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CISHQ9NSE2 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CISHQ9NSE2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CISHQ9NSE2 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CISHQ9NSE2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CISHQ9NSE2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.98■□□□□ 0.31
CISHQ9NSE2 AC087499.5-201ENST00000452760 1342 ntBASIC16.98■□□□□ 0.31
CISHQ9NSE2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CISHQ9NSE2 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CISHQ9NSE2 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.98■□□□□ 0.31
CISHQ9NSE2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.98■□□□□ 0.31
CISHQ9NSE2 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.98■□□□□ 0.31
CISHQ9NSE2 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CISHQ9NSE2 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.98■□□□□ 0.31
CISHQ9NSE2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CISHQ9NSE2 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CISHQ9NSE2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.98■□□□□ 0.31
CISHQ9NSE2 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CISHQ9NSE2 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CISHQ9NSE2 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CISHQ9NSE2 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CISHQ9NSE2 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CISHQ9NSE2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CISHQ9NSE2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CISHQ9NSE2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CISHQ9NSE2 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.98■□□□□ 0.31
CISHQ9NSE2 TSSK5P-201ENST00000423978 907 ntBASIC16.98■□□□□ 0.31
CISHQ9NSE2 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.98■□□□□ 0.31
CISHQ9NSE2 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.98■□□□□ 0.31
CISHQ9NSE2 RN7SL618P-201ENST00000477850 296 ntBASIC16.98■□□□□ 0.31
CISHQ9NSE2 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.98■□□□□ 0.31
CISHQ9NSE2 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.98■□□□□ 0.31
CISHQ9NSE2 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.98■□□□□ 0.31
CISHQ9NSE2 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.98■□□□□ 0.31
CISHQ9NSE2 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.98■□□□□ 0.31
CISHQ9NSE2 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.98■□□□□ 0.31
CISHQ9NSE2 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.98■□□□□ 0.31
CISHQ9NSE2 AL844908.2-201ENST00000609461 460 ntBASIC16.98■□□□□ 0.31
CISHQ9NSE2 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.98■□□□□ 0.31
CISHQ9NSE2 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CISHQ9NSE2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CISHQ9NSE2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
CISHQ9NSE2 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CISHQ9NSE2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.98■□□□□ 0.31
CISHQ9NSE2 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
CISHQ9NSE2 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CISHQ9NSE2 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CISHQ9NSE2 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CISHQ9NSE2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CISHQ9NSE2 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CISHQ9NSE2 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CISHQ9NSE2 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CISHQ9NSE2 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CISHQ9NSE2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
CISHQ9NSE2 AL607033.1-201ENST00000623900 1599 ntBASIC16.98■□□□□ 0.31
CISHQ9NSE2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CISHQ9NSE2 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
CISHQ9NSE2 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.97■□□□□ 0.31
CISHQ9NSE2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CISHQ9NSE2 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.97■□□□□ 0.31
CISHQ9NSE2 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CISHQ9NSE2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CISHQ9NSE2 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CISHQ9NSE2 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CISHQ9NSE2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CISHQ9NSE2 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
CISHQ9NSE2 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CISHQ9NSE2 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.97■□□□□ 0.31
CISHQ9NSE2 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CISHQ9NSE2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CISHQ9NSE2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.97■□□□□ 0.31
CISHQ9NSE2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CISHQ9NSE2 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CISHQ9NSE2 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.97■□□□□ 0.31
CISHQ9NSE2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.97■□□□□ 0.31
CISHQ9NSE2 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.97■□□□□ 0.31
CISHQ9NSE2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.97■□□□□ 0.31
CISHQ9NSE2 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.97■□□□□ 0.31
CISHQ9NSE2 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.97■□□□□ 0.31
CISHQ9NSE2 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.97■□□□□ 0.31
CISHQ9NSE2 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CISHQ9NSE2 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.97■□□□□ 0.31
CISHQ9NSE2 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.97■□□□□ 0.31
CISHQ9NSE2 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.97■□□□□ 0.31
CISHQ9NSE2 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms