Protein–RNA interactions for Protein: Q9HBW1

LRRC4, Leucine-rich repeat-containing protein 4, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4Q9HBW1 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC4Q9HBW1 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC4Q9HBW1 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC4Q9HBW1 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC4Q9HBW1 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.84■□□□□ 0.29
LRRC4Q9HBW1 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC4Q9HBW1 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LRRC4Q9HBW1 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC4Q9HBW1 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC4Q9HBW1 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.84■□□□□ 0.29
LRRC4Q9HBW1 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC4Q9HBW1 PCDHA1-201ENST00000378133 2726 ntBASIC16.83■□□□□ 0.29
LRRC4Q9HBW1 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LRRC4Q9HBW1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LRRC4Q9HBW1 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.29
LRRC4Q9HBW1 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
LRRC4Q9HBW1 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
LRRC4Q9HBW1 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LRRC4Q9HBW1 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.29
LRRC4Q9HBW1 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 INGX-202ENST00000489074 768 ntBASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 AC011467.4-201ENST00000594891 528 ntBASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 AC010491.1-201ENST00000563101 2797 ntBASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LRRC4Q9HBW1 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 AZGP1P1-201ENST00000411909 902 ntBASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 TSSK5P-201ENST00000423978 907 ntBASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 PHKG1P2-201ENST00000457537 863 ntBASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 AL512361.1-201ENST00000554200 418 ntBASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 AP003680.1-201ENST00000598970 3660 ntBASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 AC112504.1-201ENST00000623415 1841 ntBASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC4Q9HBW1 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC4Q9HBW1 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.81■□□□□ 0.28
LRRC4Q9HBW1 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC4Q9HBW1 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms