Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 AC120114.3-201ENST00000611923 658 ntBASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 BX640515.1-201ENST00000617215 977 ntBASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CHRDL1Q9BU40 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CHRDL1Q9BU40 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
CHRDL1Q9BU40 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.77□□□□□ -0.36
CHRDL1Q9BU40 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CHRDL1Q9BU40 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC12.77□□□□□ -0.36
CHRDL1Q9BU40 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CHRDL1Q9BU40 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC12.77□□□□□ -0.36
CHRDL1Q9BU40 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CHRDL1Q9BU40 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.77□□□□□ -0.36
CHRDL1Q9BU40 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CHRDL1Q9BU40 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.77□□□□□ -0.36
CHRDL1Q9BU40 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12.77□□□□□ -0.36
CHRDL1Q9BU40 AC005622.1-201ENST00000636801 1703 ntBASIC12.77□□□□□ -0.36
CHRDL1Q9BU40 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CHRDL1Q9BU40 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 KRT19P2-202ENST00000557173 1012 ntBASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 CD7-202ENST00000578509 925 ntTSL 3 BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 AL009183.1-201ENST00000603760 355 ntBASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 ZNF259P1-201ENST00000407656 1365 ntBASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
CHRDL1Q9BU40 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
CHRDL1Q9BU40 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC12.76□□□□□ -0.37
CHRDL1Q9BU40 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CHRDL1Q9BU40 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CHRDL1Q9BU40 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHRDL1Q9BU40 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHRDL1Q9BU40 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHRDL1Q9BU40 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHRDL1Q9BU40 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms