Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 CNN2P11-201ENST00000429351 262 ntBASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 ADH5P3-201ENST00000433842 1137 ntBASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 SPCS2P4-201ENST00000436160 681 ntBASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 AC098859.1-201ENST00000502915 1238 ntBASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 YBX1P5-201ENST00000509441 847 ntBASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 AC073389.1-201ENST00000595595 795 ntBASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
YIPF4Q9BSR8 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 UXT-AS1-201ENST00000590504 1525 ntBASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 MKNK2P1-201ENST00000437526 628 ntBASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 RN7SL589P-201ENST00000481268 310 ntBASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 RNA5SP410-201ENST00000516285 106 ntBASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 IGHV3-62-201ENST00000520057 340 ntBASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.09■□□□□ 0.01
YIPF4Q9BSR8 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
YIPF4Q9BSR8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.08■□□□□ 0.01
YIPF4Q9BSR8 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
YIPF4Q9BSR8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.08■□□□□ 0
YIPF4Q9BSR8 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.08■□□□□ 0
YIPF4Q9BSR8 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.08■□□□□ 0
YIPF4Q9BSR8 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
YIPF4Q9BSR8 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
YIPF4Q9BSR8 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
YIPF4Q9BSR8 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.08■□□□□ 0
YIPF4Q9BSR8 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.08■□□□□ 0
YIPF4Q9BSR8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
YIPF4Q9BSR8 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.08■□□□□ 0
YIPF4Q9BSR8 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.08■□□□□ 0
YIPF4Q9BSR8 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.08■□□□□ 0
YIPF4Q9BSR8 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.08■□□□□ 0
YIPF4Q9BSR8 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.08■□□□□ 0
YIPF4Q9BSR8 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
YIPF4Q9BSR8 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
YIPF4Q9BSR8 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
YIPF4Q9BSR8 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
YIPF4Q9BSR8 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms