Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 AC092474.2-201ENST00000424288 719 ntBASIC16.45■□□□□ 0.22
SCG3Q8WXD2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 KRT8P23-201ENST00000560090 1207 ntBASIC16.45■□□□□ 0.22
SCG3Q8WXD2 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 AC092364.2-202ENST00000597012 1073 ntBASIC16.45■□□□□ 0.22
SCG3Q8WXD2 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SCG3Q8WXD2 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 AC243562.1-201ENST00000560672 389 ntBASIC16.44■□□□□ 0.22
SCG3Q8WXD2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 AC093512.1-201ENST00000617969 520 ntBASIC16.44■□□□□ 0.22
SCG3Q8WXD2 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 WASH6P-202ENST00000359512 1437 ntBASIC16.44■□□□□ 0.22
SCG3Q8WXD2 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SCG3Q8WXD2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.43■□□□□ 0.22
SCG3Q8WXD2 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCG3Q8WXD2 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCG3Q8WXD2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCG3Q8WXD2 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SCG3Q8WXD2 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.43■□□□□ 0.22
SCG3Q8WXD2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.43■□□□□ 0.22
SCG3Q8WXD2 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.43■□□□□ 0.22
SCG3Q8WXD2 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCG3Q8WXD2 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SCG3Q8WXD2 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms