Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 AC093724.1-201ENST00000448659 1027 ntBASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 AC021097.1-201ENST00000607902 574 ntBASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 AP005117.1-201ENST00000584346 1413 ntBASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 AL365209.1-201ENST00000624418 6473 ntBASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 AC134407.2-201ENST00000625089 1978 ntBASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMIM4Q8WVI0 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 KRT18P1-202ENST00000452408 1331 ntBASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 AL805961.1-202ENST00000641562 540 ntBASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 AC127383.1-201ENST00000444697 1800 ntBASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 AC016734.2-201ENST00000624325 1377 ntBASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMIM4Q8WVI0 AL137784.3-201ENST00000623858 2288 ntBASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 BEND3P1-201ENST00000421591 1944 ntBASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SMIM4Q8WVI0 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms