Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 LINC01230-201ENST00000625222 3017 ntBASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 KRT8P44-201ENST00000441609 1350 ntBASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 MMP23A-201ENST00000234610 1017 ntBASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 SLC25A3P1-201ENST00000443844 931 ntBASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 OS9-207ENST00000439210 1946 ntTSL 2 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
SMIM11BQ8TCY0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 AC140479.7-201ENST00000636301 2332 ntBASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 LINC01568-207ENST00000641790 1380 ntBASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC10.41□□□□□ -0.74
SMIM11BQ8TCY0 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms