Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFWD2Q8NHY2 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 AL390755.1-201ENST00000623716 2027 ntBASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 TSPY19P-201ENST00000418461 509 ntBASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 TSPY18P-201ENST00000441642 509 ntBASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 AC106795.1-205ENST00000512851 1056 ntBASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 MTDHP3-201ENST00000594186 672 ntBASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 AL139288.1-201ENST00000623748 933 ntBASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFWD2Q8NHY2 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 AC005912.2-201ENST00000619492 2400 ntBASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 ELK2BP-201ENST00000415014 1224 ntBASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.85■□□□□ 0.13
RFWD2Q8NHY2 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFWD2Q8NHY2 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFWD2Q8NHY2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.84■□□□□ 0.13
RFWD2Q8NHY2 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
RFWD2Q8NHY2 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.84■□□□□ 0.13
RFWD2Q8NHY2 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.84■□□□□ 0.13
RFWD2Q8NHY2 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.84■□□□□ 0.13
RFWD2Q8NHY2 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFWD2Q8NHY2 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms