Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 RPP14-201ENST00000295959 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 FUT2-202ENST00000425340 3111 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 PROSER2-AS1-201ENST00000445498 3146 ntTSL 2 BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 LINC01007-201ENST00000434537 2291 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 LYRM1-204ENST00000439021 1558 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 BCAS3-203ENST00000408905 3514 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 TMEM86A-201ENST00000280734 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 MCU-204ENST00000536019 3224 ntTSL 2 BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 CNBD2-202ENST00000373973 1956 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 C2-209ENST00000452323 1999 ntTSL 2 BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 FP475955.4-201ENST00000623131 1990 ntBASIC9.76□□□□□ -0.85
SVIPQ8NHG7 FLJ30679-201ENST00000624773 1980 ntBASIC9.76□□□□□ -0.85
SVIPQ8NHG7 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 RGS7BP-201ENST00000334025 4160 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 BPNT1-205ENST00000469520 2737 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 HNRNPA1P23-201ENST00000491091 1133 ntBASIC9.76□□□□□ -0.85
SVIPQ8NHG7 SCARNA9-201ENST00000530422 353 ntBASIC9.76□□□□□ -0.85
SVIPQ8NHG7 AC010480.1-201ENST00000624823 684 ntBASIC9.76□□□□□ -0.85
SVIPQ8NHG7 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 CTNNBL1-203ENST00000373473 1493 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 AL645937.6-201ENST00000641122 3727 ntBASIC9.76□□□□□ -0.85
SVIPQ8NHG7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 SLC14A2-201ENST00000255226 4746 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 AL662907.3-201ENST00000641271 1932 ntBASIC9.76□□□□□ -0.85
SVIPQ8NHG7 ITGB6-203ENST00000409872 2501 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 AL139424.3-203ENST00000641117 1392 ntBASIC9.75□□□□□ -0.85
SVIPQ8NHG7 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 FCRL1-203ENST00000368176 2596 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 TMEM108-AS1-202ENST00000505721 2427 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 PPME1-202ENST00000398427 2496 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 PCSK7-215ENST00000540028 3332 ntTSL 2 BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 CD4-201ENST00000011653 3114 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 DYNC1I1-205ENST00000447467 2947 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 ZNF549-201ENST00000240719 3969 ntAPPRIS P3 TSL 2 BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 NR2F2-AS1-201ENST00000502125 1930 ntTSL 2 BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 ITGB8-205ENST00000537992 3420 ntTSL 2 BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 EFHB-201ENST00000295824 2823 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 AC080128.2-201ENST00000641520 11863 ntBASIC9.75□□□□□ -0.85
SVIPQ8NHG7 BORCS7-201ENST00000339834 2422 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 OSBPL7-202ENST00000392507 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SVIPQ8NHG7 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms