RNA–Protein interactions for RNA: ENST00000434537.1

LINC01007-201, Transcript of long intergenic non-protein coding RNA 1007, humanhuman

TSL 1 (best) BASIC

Gene LINC01007, Length 2,291 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01007-201ENST00000434537 NISCHQ9Y2I1 1504 aa20.35■□□□□ 0.85
LINC01007-201ENST00000434537 ABCC9O60706 1549 aa17.73■□□□□ 0.43
LINC01007-201ENST00000434537 CCDC180Q9P1Z9 1646 aa17.61■□□□□ 0.41
LINC01007-201ENST00000434537 ZCCHC6Q5VYS8 1495 aaKnown RBP17.14■□□□□ 0.34
LINC01007-201ENST00000434537 SLC24A1O60721 1099 aa17.04■□□□□ 0.32
LINC01007-201ENST00000434537 CHIC1Q5VXU3 224 aa16.99■□□□□ 0.31
LINC01007-201ENST00000434537 SHROOM4Q9ULL8 1493 aa16.88■□□□□ 0.29
LINC01007-201ENST00000434537 DCAF8L2P0C7V8 631 aa16.84■□□□□ 0.29
LINC01007-201ENST00000434537 DNAJC5BQ9UF47 199 aa16.82■□□□□ 0.28
LINC01007-201ENST00000434537 RB1CC1Q8TDY2 1594 aa16.78■□□□□ 0.28
LINC01007-201ENST00000434537 DCAF1Q9Y4B6 1507 aa16.77■□□□□ 0.27
LINC01007-201ENST00000434537 NACADO15069 1562 aa16.61■□□□□ 0.25
LINC01007-201ENST00000434537 MYO15BQ96JP2 1530 aa16.47■□□□□ 0.23
LINC01007-201ENST00000434537 PABPN1Q86U42 306 aaKnown RBP eCLIP16.47■□□□□ 0.23
LINC01007-201ENST00000434537 UNC13AQ9UPW8 1703 aa16.38■□□□□ 0.21
LINC01007-201ENST00000434537 EHMT2Q96KQ7 1210 aa16.35■□□□□ 0.21
LINC01007-201ENST00000434537 SCRIBQ14160 1630 aa16.33■□□□□ 0.2
LINC01007-201ENST00000434537 SUPT5HO00267 1087 aaKnown RBP16.32■□□□□ 0.2
LINC01007-201ENST00000434537 BICRAQ9NZM4 1560 aa16.3■□□□□ 0.2
LINC01007-201ENST00000434537 AEBP2Q6ZN18 517 aaPredicted RBP16.13■□□□□ 0.17
LINC01007-201ENST00000434537 CC2D2AQ9P2K1 1620 aa16■□□□□ 0.15
LINC01007-201ENST00000434537 CECR2Q9BXF3 1484 aa15.99■□□□□ 0.15
LINC01007-201ENST00000434537 EIF4G1Q04637 1599 aaKnown RBP15.91■□□□□ 0.14
LINC01007-201ENST00000434537 PLPPR3Q6T4P5 718 aa15.9■□□□□ 0.14
LINC01007-201ENST00000434537 RSF1Q96T23 1441 aaPredicted RBP15.9■□□□□ 0.14
LINC01007-201ENST00000434537 MROH2BQ7Z745 1585 aa15.77■□□□□ 0.12
LINC01007-201ENST00000434537 BAZ1AQ9NRL2 1556 aaPredicted RBP15.69■□□□□ 0.1
LINC01007-201ENST00000434537 WIZO95785 1651 aa15.68■□□□□ 0.1
LINC01007-201ENST00000434537 RTN4Q9NQC3 1192 aaKnown RBP15.64■□□□□ 0.09
LINC01007-201ENST00000434537 SMARCA4P51532 1647 aa15.61■□□□□ 0.09
LINC01007-201ENST00000434537 DNAJC5Q9H3Z4 198 aa15.6■□□□□ 0.09
LINC01007-201ENST00000434537 PHF23Q9BUL5 403 aaPredicted RBP15.49■□□□□ 0.07
LINC01007-201ENST00000434537 TOP2AP11388 1531 aaKnown RBP15.46■□□□□ 0.07
LINC01007-201ENST00000434537 PEG3Q9GZU2 1588 aa15.38■□□□□ 0.05
LINC01007-201ENST00000434537 CUX2O14529 1486 aa15.38■□□□□ 0.05
LINC01007-201ENST00000434537 SMARCA2P51531 1590 aa15.34■□□□□ 0.05
LINC01007-201ENST00000434537 CCDC88BA6NC98 1476 aa15.33■□□□□ 0.05
LINC01007-201ENST00000434537 NCAPD3P42695 1498 aa15.33■□□□□ 0.04
LINC01007-201ENST00000434537 ERCC6Q03468 1493 aa15.32■□□□□ 0.04
LINC01007-201ENST00000434537 ATAD2BQ9ULI0 1458 aa15.3■□□□□ 0.04
LINC01007-201ENST00000434537 TRIM41Q8WV44 630 aa15.27■□□□□ 0.04
LINC01007-201ENST00000434537 BAZ1BQ9UIG0 1483 aaKnown RBP15.23■□□□□ 0.03
LINC01007-201ENST00000434537 KCNA4P22459 653 aa15.21■□□□□ 0.03
LINC01007-201ENST00000434537 HMGXB3Q12766 1538 aa15.2■□□□□ 0.02
LINC01007-201ENST00000434537 CSRNP3Q8WYN3 585 aa15.18■□□□□ 0.02
LINC01007-201ENST00000434537 NESP48681 1621 aa15.16■□□□□ 0.02
LINC01007-201ENST00000434537 LOC105371045A0A1W2PR82 267 aa15.16■□□□□ 0.02
LINC01007-201ENST00000434537 DAXXQ9UER7 740 aaPredicted RBP15.15■□□□□ 0.02
LINC01007-201ENST00000434537 ABCC8Q09428 1581 aa15.14■□□□□ 0.01
LINC01007-201ENST00000434537 NCBP3Q53F19 620 aaKnown RBP15.11■□□□□ 0.01
LINC01007-201ENST00000434537 FAM9AQ8IZU1 332 aaPredicted RBP15.07■□□□□ 0
LINC01007-201ENST00000434537 THOC2Q8NI27 1593 aaKnown RBP15.07■□□□□ 0
LINC01007-201ENST00000434537 AMER1Q5JTC6 1135 aaPredicted RBP15.03■□□□□ -0
LINC01007-201ENST00000434537 LAMC3Q9Y6N6 1575 aa15.02□□□□□ -0.01
LINC01007-201ENST00000434537 PRKCSHP14314 528 aaPredicted RBP15□□□□□ -0.01
LINC01007-201ENST00000434537 KIF21AQ7Z4S6 1674 aa14.96□□□□□ -0.02
LINC01007-201ENST00000434537 WRNQ14191 1432 aaPredicted RBP eCLIP14.95□□□□□ -0.02
LINC01007-201ENST00000434537 PDS5BQ9NTI5 1447 aa14.93□□□□□ -0.02
LINC01007-201ENST00000434537 SYNJ1O43426 1573 aa14.91□□□□□ -0.02
LINC01007-201ENST00000434537 SOGA1O94964 1423 aa14.88□□□□□ -0.03
LINC01007-201ENST00000434537 CFTRP13569 1480 aa14.85□□□□□ -0.03
LINC01007-201ENST00000434537 CADPSQ9ULU8 1353 aa14.85□□□□□ -0.03
LINC01007-201ENST00000434537 MRC2Q9UBG0 1479 aa14.84□□□□□ -0.03
LINC01007-201ENST00000434537 RUSC2Q8N2Y8 1516 aa14.83□□□□□ -0.04
LINC01007-201ENST00000434537 WDR62O43379 1518 aa14.8□□□□□ -0.04
LINC01007-201ENST00000434537 TOP2BQ02880 1626 aa14.8□□□□□ -0.04
LINC01007-201ENST00000434537 PRDM2Q13029 1718 aa14.79□□□□□ -0.04
LINC01007-201ENST00000434537 EEA1Q15075 1411 aa14.78□□□□□ -0.04
LINC01007-201ENST00000434537 BIVM-ERCC5R4GMW8 1640 aa14.77□□□□□ -0.04
LINC01007-201ENST00000434537 HRCP23327 699 aa14.75□□□□□ -0.05
LINC01007-201ENST00000434537 CUX1P39880 1505 aa14.73□□□□□ -0.05
LINC01007-201ENST00000434537 CEP164Q9UPV0 1460 aa14.72□□□□□ -0.05
LINC01007-201ENST00000434537 FANCD2Q9BXW9 1451 aa14.69□□□□□ -0.06
LINC01007-201ENST00000434537 PCGF6Q9BYE7 350 aa14.68□□□□□ -0.06
LINC01007-201ENST00000434537 GOLGA3Q08378 1498 aa14.64□□□□□ -0.07
LINC01007-201ENST00000434537 KIF21BO75037 1637 aa14.63□□□□□ -0.07
LINC01007-201ENST00000434537 TNIKQ9UKE5 1360 aa14.62□□□□□ -0.07
LINC01007-201ENST00000434537 CEP162Q5TB80 1403 aa14.61□□□□□ -0.07
LINC01007-201ENST00000434537 UBTFP17480 764 aaKnown RBP14.61□□□□□ -0.07
LINC01007-201ENST00000434537 OSCARQ8IYS5 282 aa14.61□□□□□ -0.07
LINC01007-201ENST00000434537 URB2Q14146 1524 aaKnown RBP14.59□□□□□ -0.07
LINC01007-201ENST00000434537 RAPGEF2Q9Y4G8 1499 aa14.56□□□□□ -0.08
LINC01007-201ENST00000434537 TRIM26Q12899 539 aaPredicted RBP14.55□□□□□ -0.08
LINC01007-201ENST00000434537 TIMELESSQ9UNS1 1208 aa14.55□□□□□ -0.08
LINC01007-201ENST00000434537 FGD5Q6ZNL6 1462 aa14.53□□□□□ -0.08
LINC01007-201ENST00000434537 KIF27Q86VH2 1401 aa14.53□□□□□ -0.08
LINC01007-201ENST00000434537 DNMBPQ6XZF7 1577 aa14.5□□□□□ -0.09
LINC01007-201ENST00000434537 PRXQ9BXM0 1461 aa14.49□□□□□ -0.09
LINC01007-201ENST00000434537 RIMBP3CA6NJZ7 1639 aa14.48□□□□□ -0.09
LINC01007-201ENST00000434537 RIMBP3BA6NNM3 1639 aa14.48□□□□□ -0.09
LINC01007-201ENST00000434537 RIMBP3Q9UFD9 1639 aa14.48□□□□□ -0.09
LINC01007-201ENST00000434537 ERICH3Q5RHP9 1530 aa14.47□□□□□ -0.09
LINC01007-201ENST00000434537 PPARGC1BQ86YN6 1023 aaKnown RBP14.47□□□□□ -0.09
LINC01007-201ENST00000434537 TOPBP1Q92547 1522 aa14.47□□□□□ -0.09
LINC01007-201ENST00000434537 IFT140Q96RY7 1462 aa14.45□□□□□ -0.1
LINC01007-201ENST00000434537 ZNF608Q9ULD9 1512 aaPredicted RBP14.44□□□□□ -0.1
LINC01007-201ENST00000434537 POLA1P09884 1462 aaPredicted RBP14.43□□□□□ -0.1
LINC01007-201ENST00000434537 CLIP1P30622 1438 aa14.43□□□□□ -0.1
LINC01007-201ENST00000434537 RAD54L2Q9Y4B4 1467 aa14.41□□□□□ -0.1
LINC01007-201ENST00000434537 IGF1RP08069 1367 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms