RNA–Protein interactions for RNA: ENST00000409872.1

ITGB6-203, Transcript of integrin subunit beta 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB6, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB6-203ENST00000409872 NISCHQ9Y2I1 1504 aa20.77■□□□□ 0.91
ITGB6-203ENST00000409872 PELP1Q8IZL8 1130 aaKnown RBP17.79■□□□□ 0.44
ITGB6-203ENST00000409872 CCDC180Q9P1Z9 1646 aa17.69■□□□□ 0.42
ITGB6-203ENST00000409872 SHROOM4Q9ULL8 1493 aa17.68■□□□□ 0.42
ITGB6-203ENST00000409872 HRCP23327 699 aa17.61■□□□□ 0.41
ITGB6-203ENST00000409872 DCAF8L2P0C7V8 631 aa17.52■□□□□ 0.39
ITGB6-203ENST00000409872 ZCCHC6Q5VYS8 1495 aaKnown RBP17.49■□□□□ 0.39
ITGB6-203ENST00000409872 MYT1Q01538 1121 aa17.34■□□□□ 0.37
ITGB6-203ENST00000409872 SUPT5HO00267 1087 aaKnown RBP17.21■□□□□ 0.35
ITGB6-203ENST00000409872 DCAF1Q9Y4B6 1507 aa16.95■□□□□ 0.3
ITGB6-203ENST00000409872 ABCC9O60706 1549 aa16.87■□□□□ 0.29
ITGB6-203ENST00000409872 PPARGC1BQ86YN6 1023 aaKnown RBP16.85■□□□□ 0.29
ITGB6-203ENST00000409872 PCGF6Q9BYE7 350 aa16.82■□□□□ 0.28
ITGB6-203ENST00000409872 MYO15BQ96JP2 1530 aa16.76■□□□□ 0.27
ITGB6-203ENST00000409872 SCAF1Q9H7N4 1312 aaKnown RBP16.7■□□□□ 0.26
ITGB6-203ENST00000409872 SCRIBQ14160 1630 aa16.67■□□□□ 0.26
ITGB6-203ENST00000409872 ZEB1P37275 1124 aaPredicted RBP16.64■□□□□ 0.25
ITGB6-203ENST00000409872 CHIC1Q5VXU3 224 aa16.56■□□□□ 0.24
ITGB6-203ENST00000409872 TRIM26Q12899 539 aaPredicted RBP16.48■□□□□ 0.23
ITGB6-203ENST00000409872 TTBK1Q5TCY1 1321 aaPredicted RBP16.46■□□□□ 0.23
ITGB6-203ENST00000409872 NACADO15069 1562 aa16.46■□□□□ 0.23
ITGB6-203ENST00000409872 RSF1Q96T23 1441 aaPredicted RBP16.37■□□□□ 0.21
ITGB6-203ENST00000409872 ACIN1Q9UKV3 1341 aaKnown RBP16.32■□□□□ 0.2
ITGB6-203ENST00000409872 CECR2Q9BXF3 1484 aa16.31■□□□□ 0.2
ITGB6-203ENST00000409872 RB1CC1Q8TDY2 1594 aa16.26■□□□□ 0.19
ITGB6-203ENST00000409872 MROH2BQ7Z745 1585 aa16.18■□□□□ 0.18
ITGB6-203ENST00000409872 CENPBP07199 599 aaPredicted RBP16.13■□□□□ 0.17
ITGB6-203ENST00000409872 LOC105371045A0A1W2PR82 267 aa16.12■□□□□ 0.17
ITGB6-203ENST00000409872 NEUROD1Q13562 356 aa16.11■□□□□ 0.17
ITGB6-203ENST00000409872 PABPN1Q86U42 306 aaKnown RBP eCLIP16.1■□□□□ 0.17
ITGB6-203ENST00000409872 WIZO95785 1651 aa16.08■□□□□ 0.16
ITGB6-203ENST00000409872 UNC13AQ9UPW8 1703 aa16.06■□□□□ 0.16
ITGB6-203ENST00000409872 GTF3C3Q9Y5Q9 886 aa16.06■□□□□ 0.16
ITGB6-203ENST00000409872 TRIM41Q8WV44 630 aa15.99■□□□□ 0.15
ITGB6-203ENST00000409872 BAZ1AQ9NRL2 1556 aaPredicted RBP15.94■□□□□ 0.14
ITGB6-203ENST00000409872 FAM9AQ8IZU1 332 aaPredicted RBP15.94■□□□□ 0.14
ITGB6-203ENST00000409872 BICRAQ9NZM4 1560 aa15.88■□□□□ 0.13
ITGB6-203ENST00000409872 EHMT2Q96KQ7 1210 aa15.88■□□□□ 0.13
ITGB6-203ENST00000409872 SMARCA4P51532 1647 aa15.86■□□□□ 0.13
ITGB6-203ENST00000409872 PRKCSHP14314 528 aaPredicted RBP15.85■□□□□ 0.13
ITGB6-203ENST00000409872 DIEXFQ68CQ4 756 aaKnown RBP15.79■□□□□ 0.12
ITGB6-203ENST00000409872 CCDC88BA6NC98 1476 aa15.75■□□□□ 0.11
ITGB6-203ENST00000409872 TOP2AP11388 1531 aaKnown RBP15.74■□□□□ 0.11
ITGB6-203ENST00000409872 DNAJC5BQ9UF47 199 aa15.72■□□□□ 0.11
ITGB6-203ENST00000409872 BCL11AQ9H165 835 aa15.7■□□□□ 0.1
ITGB6-203ENST00000409872 CLSPNQ9HAW4 1339 aa15.69■□□□□ 0.1
ITGB6-203ENST00000409872 SMARCA2P51531 1590 aa15.68■□□□□ 0.1
ITGB6-203ENST00000409872 EIF4G1Q04637 1599 aaKnown RBP15.65■□□□□ 0.1
ITGB6-203ENST00000409872 ABCC8Q09428 1581 aa15.65■□□□□ 0.1
ITGB6-203ENST00000409872 ANP32EQ9BTT0 268 aa15.61■□□□□ 0.09
ITGB6-203ENST00000409872 ATAD2BQ9ULI0 1458 aa15.56■□□□□ 0.08
ITGB6-203ENST00000409872 CCER1Q8TC90 406 aaPredicted RBP15.54■□□□□ 0.08
ITGB6-203ENST00000409872 PEG3Q9GZU2 1588 aa15.52■□□□□ 0.08
ITGB6-203ENST00000409872 ZNF316A6NFI3 1004 aaPredicted RBP15.49■□□□□ 0.07
ITGB6-203ENST00000409872 BAZ1BQ9UIG0 1483 aaKnown RBP15.49■□□□□ 0.07
ITGB6-203ENST00000409872 ERICH6Q7L0X2 663 aa15.47■□□□□ 0.07
ITGB6-203ENST00000409872 SOGA1O94964 1423 aa15.46■□□□□ 0.07
ITGB6-203ENST00000409872 APLP2Q06481 763 aa15.46■□□□□ 0.06
ITGB6-203ENST00000409872 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.45■□□□□ 0.06
ITGB6-203ENST00000409872 RUSC2Q8N2Y8 1516 aa15.42■□□□□ 0.06
ITGB6-203ENST00000409872 WRNQ14191 1432 aaPredicted RBP eCLIP15.37■□□□□ 0.05
ITGB6-203ENST00000409872 CSRNP3Q8WYN3 585 aa15.33■□□□□ 0.04
ITGB6-203ENST00000409872 TSHZ2Q9NRE2 1034 aa15.32■□□□□ 0.04
ITGB6-203ENST00000409872 SYNJ1O43426 1573 aa15.31■□□□□ 0.04
ITGB6-203ENST00000409872 SUPT16HQ9Y5B9 1047 aaKnown RBP15.3■□□□□ 0.04
ITGB6-203ENST00000409872 UBTFP17480 764 aaKnown RBP15.29■□□□□ 0.04
ITGB6-203ENST00000409872 MIER1Q8N108 512 aa15.28■□□□□ 0.04
ITGB6-203ENST00000409872 NCAPD3P42695 1498 aa15.28■□□□□ 0.04
ITGB6-203ENST00000409872 YTHDC1Q96MU7 727 aaKnown RBP15.27■□□□□ 0.04
ITGB6-203ENST00000409872 SLC24A1O60721 1099 aa15.24■□□□□ 0.03
ITGB6-203ENST00000409872 CEP162Q5TB80 1403 aa15.21■□□□□ 0.03
ITGB6-203ENST00000409872 HMGXB3Q12766 1538 aa15.2■□□□□ 0.02
ITGB6-203ENST00000409872 EEA1Q15075 1411 aa15.18■□□□□ 0.02
ITGB6-203ENST00000409872 RANGAP1P46060 587 aaPredicted RBP15.17■□□□□ 0.02
ITGB6-203ENST00000409872 TNIKQ9UKE5 1360 aa15.17■□□□□ 0.02
ITGB6-203ENST00000409872 CC2D2AQ9P2K1 1620 aa15.14■□□□□ 0.01
ITGB6-203ENST00000409872 GOLGA3Q08378 1498 aa15.12■□□□□ 0.01
ITGB6-203ENST00000409872 TOP2BQ02880 1626 aa15.09■□□□□ 0.01
ITGB6-203ENST00000409872 CFTRP13569 1480 aa15.08■□□□□ 0.01
ITGB6-203ENST00000409872 MYT1LQ9UL68 1186 aa15.07■□□□□ 0
ITGB6-203ENST00000409872 RAPGEF2Q9Y4G8 1499 aa15.07■□□□□ 0
ITGB6-203ENST00000409872 CUX1P39880 1505 aa15.06■□□□□ 0
ITGB6-203ENST00000409872 CEP164Q9UPV0 1460 aa15.06■□□□□ 0
ITGB6-203ENST00000409872 BIVM-ERCC5R4GMW8 1640 aa15.02□□□□□ -0.01
ITGB6-203ENST00000409872 KIF21BO75037 1637 aa15□□□□□ -0.01
ITGB6-203ENST00000409872 CADPSQ9ULU8 1353 aa15□□□□□ -0.01
ITGB6-203ENST00000409872 CLIP1P30622 1438 aa14.99□□□□□ -0.01
ITGB6-203ENST00000409872 RBM19Q9Y4C8 960 aaKnown RBP14.93□□□□□ -0.02
ITGB6-203ENST00000409872 NESP48681 1621 aa14.91□□□□□ -0.02
ITGB6-203ENST00000409872 KIF27Q86VH2 1401 aa14.9□□□□□ -0.02
ITGB6-203ENST00000409872 PRXQ9BXM0 1461 aa14.9□□□□□ -0.02
ITGB6-203ENST00000409872 FANCIQ9NVI1 1328 aa14.88□□□□□ -0.03
ITGB6-203ENST00000409872 CUX2O14529 1486 aa14.86□□□□□ -0.03
ITGB6-203ENST00000409872 FANCD2Q9BXW9 1451 aa14.85□□□□□ -0.03
ITGB6-203ENST00000409872 PRDM2Q13029 1718 aa14.85□□□□□ -0.03
ITGB6-203ENST00000409872 VPS8Q8N3P4 1428 aa14.85□□□□□ -0.03
ITGB6-203ENST00000409872 FGD5Q6ZNL6 1462 aa14.84□□□□□ -0.03
ITGB6-203ENST00000409872 IGF1RP08069 1367 aa14.82□□□□□ -0.04
ITGB6-203ENST00000409872 HNRNPUL2Q1KMD3 747 aaKnown RBP14.82□□□□□ -0.04
ITGB6-203ENST00000409872 ERICH3Q5RHP9 1530 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms