Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
HIPK4Q8NE63 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.6■□□□□ 0.09
HIPK4Q8NE63 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 AC131009.4-201ENST00000624048 1740 ntBASIC15.6■□□□□ 0.09
HIPK4Q8NE63 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HIPK4Q8NE63 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 AC007292.2-201ENST00000593524 1812 ntBASIC15.59■□□□□ 0.09
HIPK4Q8NE63 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 PI4KAP1-204ENST00000612579 1703 ntBASIC15.59■□□□□ 0.09
HIPK4Q8NE63 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.59■□□□□ 0.09
HIPK4Q8NE63 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.58■□□□□ 0.09
HIPK4Q8NE63 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HIPK4Q8NE63 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HIPK4Q8NE63 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.58■□□□□ 0.09
HIPK4Q8NE63 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HIPK4Q8NE63 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
HIPK4Q8NE63 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
HIPK4Q8NE63 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HIPK4Q8NE63 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.58■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms