Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 AP001282.1-201ENST00000531301 1499 ntBASIC16.29■□□□□ 0.2
KDM1BQ8NB78 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
KDM1BQ8NB78 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 AC063926.2-201ENST00000623766 1308 ntBASIC16.28■□□□□ 0.2
KDM1BQ8NB78 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 DOC2GP-202ENST00000514950 1163 ntBASIC16.28■□□□□ 0.2
KDM1BQ8NB78 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 CR383656.12-201ENST00000549567 513 ntBASIC16.28■□□□□ 0.2
KDM1BQ8NB78 TP53TG3HP-202ENST00000569755 579 ntBASIC16.28■□□□□ 0.2
KDM1BQ8NB78 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 AC025048.3-201ENST00000590609 569 ntBASIC16.28■□□□□ 0.2
KDM1BQ8NB78 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 SRD5A3P1-201ENST00000603021 949 ntBASIC16.28■□□□□ 0.2
KDM1BQ8NB78 AC012645.4-201ENST00000610691 1061 ntBASIC16.28■□□□□ 0.2
KDM1BQ8NB78 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 AC005702.4-201ENST00000618393 416 ntBASIC16.28■□□□□ 0.2
KDM1BQ8NB78 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.28■□□□□ 0.2
KDM1BQ8NB78 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.27■□□□□ 0.2
KDM1BQ8NB78 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KDM1BQ8NB78 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.27■□□□□ 0.2
KDM1BQ8NB78 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.27■□□□□ 0.2
KDM1BQ8NB78 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KDM1BQ8NB78 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.27■□□□□ 0.2
KDM1BQ8NB78 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
KDM1BQ8NB78 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KDM1BQ8NB78 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KDM1BQ8NB78 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.27■□□□□ 0.2
KDM1BQ8NB78 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KDM1BQ8NB78 API5-211ENST00000534695 560 ntTSL 5 BASIC16.27■□□□□ 0.2
KDM1BQ8NB78 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.27■□□□□ 0.2
KDM1BQ8NB78 AC104794.3-201ENST00000566840 1248 ntBASIC16.27■□□□□ 0.2
KDM1BQ8NB78 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.27■□□□□ 0.2
KDM1BQ8NB78 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.27■□□□□ 0.2
KDM1BQ8NB78 AL132655.2-201ENST00000596276 594 ntBASIC16.27■□□□□ 0.2
KDM1BQ8NB78 AC239800.4-201ENST00000603712 296 ntBASIC16.27■□□□□ 0.2
KDM1BQ8NB78 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.27■□□□□ 0.2
KDM1BQ8NB78 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.27■□□□□ 0.2
KDM1BQ8NB78 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KDM1BQ8NB78 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KDM1BQ8NB78 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
KDM1BQ8NB78 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
KDM1BQ8NB78 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
KDM1BQ8NB78 AC007541.1-201ENST00000570282 1469 ntBASIC16.27■□□□□ 0.19
KDM1BQ8NB78 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
KDM1BQ8NB78 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
KDM1BQ8NB78 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
KDM1BQ8NB78 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.27■□□□□ 0.19
KDM1BQ8NB78 AC103702.1-201ENST00000548801 2630 ntBASIC16.27■□□□□ 0.19
KDM1BQ8NB78 KRT8P37-201ENST00000451609 1420 ntBASIC16.27■□□□□ 0.19
KDM1BQ8NB78 HYMAI-201ENST00000635591 3347 ntBASIC16.27■□□□□ 0.19
KDM1BQ8NB78 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
KDM1BQ8NB78 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
KDM1BQ8NB78 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
KDM1BQ8NB78 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
KDM1BQ8NB78 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
KDM1BQ8NB78 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.27■□□□□ 0.19
KDM1BQ8NB78 Z97205.2-201ENST00000564697 1639 ntBASIC16.27■□□□□ 0.19
KDM1BQ8NB78 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KDM1BQ8NB78 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms