Protein–RNA interactions for Protein: Q8N6N3

C1orf52, UPF0690 protein C1orf52, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf52Q8N6N3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 AC068587.6-202ENST00000641839 5619 ntBASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 AC126177.1-201ENST00000547829 2218 ntBASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C1orf52Q8N6N3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 AC004987.2-201ENST00000395959 1148 ntBASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 AC005237.2-201ENST00000434368 219 ntBASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 MIR4469-201ENST00000583919 79 ntBASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 REXO1L1P-202ENST00000608646 1974 ntBASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 AC099063.4-201ENST00000641099 1602 ntBASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1orf52Q8N6N3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C1orf52Q8N6N3 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.29■□□□□ 0.04
C1orf52Q8N6N3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C1orf52Q8N6N3 AC020658.6-201ENST00000623564 1870 ntBASIC15.29■□□□□ 0.04
C1orf52Q8N6N3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C1orf52Q8N6N3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C1orf52Q8N6N3 AC092127.1-201ENST00000567093 3455 ntBASIC15.29■□□□□ 0.04
C1orf52Q8N6N3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
C1orf52Q8N6N3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.29■□□□□ 0.04
C1orf52Q8N6N3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C1orf52Q8N6N3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
C1orf52Q8N6N3 AC144831.1-201ENST00000573312 2656 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms