Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 AL139010.1-201ENST00000454878 894 ntBASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 RARRES2P9-201ENST00000565168 469 ntBASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 AC004835.2-201ENST00000603762 682 ntBASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
TTC9CQ8N5M4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 AC004461.1-201ENST00000412461 403 ntBASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 RPS8P6-201ENST00000426177 609 ntBASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TTC9CQ8N5M4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms