Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CCDC83Q8IWF9 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC83Q8IWF9 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC83Q8IWF9 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CCDC83Q8IWF9 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CCDC83Q8IWF9 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CCDC83Q8IWF9 MIR346-201ENST00000362234 95 ntBASIC18.78■□□□□ 0.6
CCDC83Q8IWF9 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC83Q8IWF9 FAM220BP-201ENST00000377689 816 ntBASIC18.78■□□□□ 0.6
CCDC83Q8IWF9 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC83Q8IWF9 MCCD1P2-201ENST00000423228 335 ntBASIC18.78■□□□□ 0.6
CCDC83Q8IWF9 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC83Q8IWF9 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC83Q8IWF9 MIR4313-201ENST00000580760 101 ntBASIC18.78■□□□□ 0.6
CCDC83Q8IWF9 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.78■□□□□ 0.6
CCDC83Q8IWF9 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC83Q8IWF9 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC83Q8IWF9 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC83Q8IWF9 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC83Q8IWF9 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC83Q8IWF9 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC83Q8IWF9 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC83Q8IWF9 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC83Q8IWF9 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC83Q8IWF9 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC83Q8IWF9 TNRC18P2-201ENST00000417666 2714 ntBASIC18.78■□□□□ 0.6
CCDC83Q8IWF9 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC83Q8IWF9 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CCDC83Q8IWF9 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC83Q8IWF9 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 AL109954.1-202ENST00000564051 2148 ntBASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 MIR574-201ENST00000385209 96 ntBASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 RPS8P6-201ENST00000426177 609 ntBASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 ALG1L5P-201ENST00000482043 771 ntBASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
CCDC83Q8IWF9 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
CCDC83Q8IWF9 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC83Q8IWF9 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.77■□□□□ 0.59
CCDC83Q8IWF9 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.77■□□□□ 0.59
CCDC83Q8IWF9 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC83Q8IWF9 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC83Q8IWF9 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC83Q8IWF9 AC023157.3-201ENST00000619086 2088 ntBASIC18.77■□□□□ 0.59
CCDC83Q8IWF9 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC83Q8IWF9 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 AC006486.2-201ENST00000624246 2199 ntBASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC83Q8IWF9 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms