Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHFQ7M4L6 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHFQ7M4L6 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.51□□□□□ -0.09
SHFQ7M4L6 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SHFQ7M4L6 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.51□□□□□ -0.09
SHFQ7M4L6 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHFQ7M4L6 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SHFQ7M4L6 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHFQ7M4L6 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHFQ7M4L6 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHFQ7M4L6 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SHFQ7M4L6 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHFQ7M4L6 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHFQ7M4L6 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHFQ7M4L6 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
SHFQ7M4L6 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHFQ7M4L6 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHFQ7M4L6 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.5□□□□□ -0.09
SHFQ7M4L6 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SHFQ7M4L6 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHFQ7M4L6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SHFQ7M4L6 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SHFQ7M4L6 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHFQ7M4L6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHFQ7M4L6 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.5□□□□□ -0.09
SHFQ7M4L6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SHFQ7M4L6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHFQ7M4L6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHFQ7M4L6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SHFQ7M4L6 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.5□□□□□ -0.09
SHFQ7M4L6 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SHFQ7M4L6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHFQ7M4L6 AC108751.1-201ENST00000490852 363 ntBASIC14.5□□□□□ -0.09
SHFQ7M4L6 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.5□□□□□ -0.09
SHFQ7M4L6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.5□□□□□ -0.09
SHFQ7M4L6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
SHFQ7M4L6 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHFQ7M4L6 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.5□□□□□ -0.09
SHFQ7M4L6 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHFQ7M4L6 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHFQ7M4L6 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.5□□□□□ -0.09
SHFQ7M4L6 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SHFQ7M4L6 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHFQ7M4L6 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SHFQ7M4L6 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHFQ7M4L6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SHFQ7M4L6 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SHFQ7M4L6 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHFQ7M4L6 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHFQ7M4L6 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
SHFQ7M4L6 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHFQ7M4L6 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.49□□□□□ -0.09
SHFQ7M4L6 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SHFQ7M4L6 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHFQ7M4L6 AC090616.6-203ENST00000579186 1945 ntBASIC14.49□□□□□ -0.09
SHFQ7M4L6 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SHFQ7M4L6 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHFQ7M4L6 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
SHFQ7M4L6 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHFQ7M4L6 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHFQ7M4L6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.49□□□□□ -0.09
SHFQ7M4L6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.49□□□□□ -0.09
SHFQ7M4L6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.49□□□□□ -0.09
SHFQ7M4L6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.49□□□□□ -0.09
SHFQ7M4L6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.49□□□□□ -0.09
SHFQ7M4L6 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SHFQ7M4L6 AC092910.1-201ENST00000482027 1129 ntBASIC14.49□□□□□ -0.09
SHFQ7M4L6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.49□□□□□ -0.09
SHFQ7M4L6 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.49□□□□□ -0.09
SHFQ7M4L6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.49□□□□□ -0.09
SHFQ7M4L6 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SHFQ7M4L6 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SHFQ7M4L6 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.49□□□□□ -0.09
SHFQ7M4L6 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.49□□□□□ -0.09
SHFQ7M4L6 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHFQ7M4L6 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHFQ7M4L6 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHFQ7M4L6 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHFQ7M4L6 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHFQ7M4L6 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.49□□□□□ -0.09
SHFQ7M4L6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SHFQ7M4L6 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SHFQ7M4L6 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHFQ7M4L6 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHFQ7M4L6 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHFQ7M4L6 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.48□□□□□ -0.09
SHFQ7M4L6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHFQ7M4L6 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHFQ7M4L6 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHFQ7M4L6 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHFQ7M4L6 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHFQ7M4L6 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHFQ7M4L6 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.48□□□□□ -0.09
SHFQ7M4L6 AC009090.5-201ENST00000624886 2285 ntBASIC14.48□□□□□ -0.09
SHFQ7M4L6 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHFQ7M4L6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHFQ7M4L6 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHFQ7M4L6 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.48□□□□□ -0.09
SHFQ7M4L6 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.48□□□□□ -0.09
SHFQ7M4L6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms