Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC20.91■□□□□ 0.94
COL16A1Q07092 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL16A1Q07092 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL16A1Q07092 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
COL16A1Q07092 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL16A1Q07092 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL16A1Q07092 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL16A1Q07092 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL16A1Q07092 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
COL16A1Q07092 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.9■□□□□ 0.94
COL16A1Q07092 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL16A1Q07092 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.9■□□□□ 0.94
COL16A1Q07092 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
COL16A1Q07092 DNM1P51-201ENST00000558149 522 ntBASIC20.9■□□□□ 0.94
COL16A1Q07092 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL16A1Q07092 AL118516.1-201ENST00000564152 670 ntBASIC20.9■□□□□ 0.94
COL16A1Q07092 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC20.9■□□□□ 0.94
COL16A1Q07092 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL16A1Q07092 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC20.9■□□□□ 0.94
COL16A1Q07092 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL16A1Q07092 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL16A1Q07092 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL16A1Q07092 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL16A1Q07092 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL16A1Q07092 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL16A1Q07092 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL16A1Q07092 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL16A1Q07092 AL390961.4-201ENST00000623958 2535 ntBASIC20.9■□□□□ 0.94
COL16A1Q07092 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL16A1Q07092 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL16A1Q07092 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL16A1Q07092 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC20.89■□□□□ 0.94
COL16A1Q07092 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC20.89■□□□□ 0.94
COL16A1Q07092 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC20.89■□□□□ 0.94
COL16A1Q07092 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC20.89■□□□□ 0.94
COL16A1Q07092 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC20.89■□□□□ 0.94
COL16A1Q07092 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
COL16A1Q07092 MIR6858-201ENST00000620733 67 ntBASIC20.89■□□□□ 0.94
COL16A1Q07092 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC20.89■□□□□ 0.94
COL16A1Q07092 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL16A1Q07092 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL16A1Q07092 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
COL16A1Q07092 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL16A1Q07092 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC20.89■□□□□ 0.93
COL16A1Q07092 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.89■□□□□ 0.93
COL16A1Q07092 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL16A1Q07092 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC20.89■□□□□ 0.93
COL16A1Q07092 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC20.89■□□□□ 0.93
COL16A1Q07092 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC20.89■□□□□ 0.93
COL16A1Q07092 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC20.89■□□□□ 0.93
COL16A1Q07092 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC20.89■□□□□ 0.93
COL16A1Q07092 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL16A1Q07092 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL16A1Q07092 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.88■□□□□ 0.93
COL16A1Q07092 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
COL16A1Q07092 AC020916.1-201ENST00000587762 1774 ntBASIC20.88■□□□□ 0.93
COL16A1Q07092 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
COL16A1Q07092 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL16A1Q07092 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL16A1Q07092 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
COL16A1Q07092 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC20.88■□□□□ 0.93
COL16A1Q07092 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL16A1Q07092 AP000356.3-201ENST00000382243 753 ntBASIC20.88■□□□□ 0.93
COL16A1Q07092 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL16A1Q07092 LSM5-207ENST00000410044 687 ntTSL 3 BASIC20.88■□□□□ 0.93
COL16A1Q07092 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC20.88■□□□□ 0.93
COL16A1Q07092 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL16A1Q07092 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC20.88■□□□□ 0.93
COL16A1Q07092 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC20.88■□□□□ 0.93
COL16A1Q07092 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC20.88■□□□□ 0.93
COL16A1Q07092 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC20.88■□□□□ 0.93
COL16A1Q07092 SAMD11P1-201ENST00000571429 661 ntBASIC20.88■□□□□ 0.93
COL16A1Q07092 RNF146-211ENST00000609447 607 ntTSL 4 BASIC20.88■□□□□ 0.93
COL16A1Q07092 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC20.88■□□□□ 0.93
COL16A1Q07092 NAP1L6-202ENST00000641404 1222 ntBASIC20.88■□□□□ 0.93
COL16A1Q07092 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.88■□□□□ 0.93
COL16A1Q07092 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL16A1Q07092 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL16A1Q07092 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL16A1Q07092 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
COL16A1Q07092 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.88■□□□□ 0.93
COL16A1Q07092 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL16A1Q07092 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL16A1Q07092 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL16A1Q07092 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
COL16A1Q07092 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL16A1Q07092 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL16A1Q07092 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC20.87■□□□□ 0.93
COL16A1Q07092 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL16A1Q07092 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC20.87■□□□□ 0.93
COL16A1Q07092 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL16A1Q07092 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL16A1Q07092 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL16A1Q07092 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL16A1Q07092 SOD2-202ENST00000367054 815 ntTSL 2 BASIC20.87■□□□□ 0.93
COL16A1Q07092 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC20.87■□□□□ 0.93
COL16A1Q07092 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC20.87■□□□□ 0.93
COL16A1Q07092 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC20.87■□□□□ 0.93
COL16A1Q07092 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC20.87■□□□□ 0.93
COL16A1Q07092 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms