Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-1P78426 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-1P78426 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
NKX6-1P78426 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NKX6-1P78426 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.16□□□□□ -0.14
NKX6-1P78426 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.16□□□□□ -0.14
NKX6-1P78426 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.16□□□□□ -0.14
NKX6-1P78426 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.16□□□□□ -0.14
NKX6-1P78426 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.16□□□□□ -0.14
NKX6-1P78426 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.16□□□□□ -0.14
NKX6-1P78426 AC003101.2-201ENST00000612557 442 ntBASIC14.16□□□□□ -0.14
NKX6-1P78426 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.16□□□□□ -0.14
NKX6-1P78426 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.16□□□□□ -0.14
NKX6-1P78426 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-1P78426 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-1P78426 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NKX6-1P78426 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.16□□□□□ -0.14
NKX6-1P78426 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-1P78426 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-1P78426 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-1P78426 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.16□□□□□ -0.14
NKX6-1P78426 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-1P78426 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.16□□□□□ -0.14
NKX6-1P78426 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-1P78426 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NKX6-1P78426 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-1P78426 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NKX6-1P78426 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-1P78426 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-1P78426 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-1P78426 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-1P78426 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-1P78426 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-1P78426 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.15□□□□□ -0.14
NKX6-1P78426 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.15□□□□□ -0.14
NKX6-1P78426 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.15□□□□□ -0.14
NKX6-1P78426 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-1P78426 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NKX6-1P78426 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-1P78426 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.15□□□□□ -0.14
NKX6-1P78426 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-1P78426 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
NKX6-1P78426 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-1P78426 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-1P78426 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-1P78426 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-1P78426 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-1P78426 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-1P78426 PCGF3-213ENST00000620529 1899 ntBASIC14.15□□□□□ -0.14
NKX6-1P78426 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-1P78426 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-1P78426 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-1P78426 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NKX6-1P78426 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-1P78426 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NKX6-1P78426 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-1P78426 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-1P78426 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.15□□□□□ -0.14
NKX6-1P78426 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.15□□□□□ -0.14
NKX6-1P78426 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.15□□□□□ -0.14
NKX6-1P78426 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-1P78426 AC093724.1-201ENST00000448659 1027 ntBASIC14.15□□□□□ -0.14
NKX6-1P78426 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NKX6-1P78426 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.15□□□□□ -0.14
NKX6-1P78426 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-1P78426 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.15□□□□□ -0.14
NKX6-1P78426 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-1P78426 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-1P78426 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NKX6-1P78426 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-1P78426 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.15□□□□□ -0.14
NKX6-1P78426 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-1P78426 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-1P78426 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-1P78426 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-1P78426 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-1P78426 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
NKX6-1P78426 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.15□□□□□ -0.14
NKX6-1P78426 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-1P78426 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-1P78426 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.15□□□□□ -0.14
NKX6-1P78426 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.15□□□□□ -0.15
NKX6-1P78426 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
NKX6-1P78426 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.14□□□□□ -0.15
NKX6-1P78426 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NKX6-1P78426 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NKX6-1P78426 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-1P78426 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-1P78426 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-1P78426 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-1P78426 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.14□□□□□ -0.15
NKX6-1P78426 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NKX6-1P78426 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-1P78426 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-1P78426 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.14□□□□□ -0.15
NKX6-1P78426 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-1P78426 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-1P78426 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-1P78426 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-1P78426 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms