Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.7□□□□□ -0.06
CLDN20P56880 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.7□□□□□ -0.06
CLDN20P56880 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN20P56880 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN20P56880 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN20P56880 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.7□□□□□ -0.06
CLDN20P56880 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN20P56880 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN20P56880 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN20P56880 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.7□□□□□ -0.06
CLDN20P56880 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN20P56880 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.7□□□□□ -0.06
CLDN20P56880 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.7□□□□□ -0.06
CLDN20P56880 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.7□□□□□ -0.06
CLDN20P56880 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.7□□□□□ -0.06
CLDN20P56880 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN20P56880 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN20P56880 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN20P56880 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN20P56880 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN20P56880 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CLDN20P56880 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN20P56880 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.69□□□□□ -0.06
CLDN20P56880 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN20P56880 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.69□□□□□ -0.06
CLDN20P56880 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN20P56880 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN20P56880 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.69□□□□□ -0.06
CLDN20P56880 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN20P56880 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN20P56880 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN20P56880 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CLDN20P56880 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN20P56880 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN20P56880 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN20P56880 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN20P56880 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN20P56880 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CLDN20P56880 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN20P56880 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CLDN20P56880 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.69□□□□□ -0.06
CLDN20P56880 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN20P56880 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN20P56880 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.69□□□□□ -0.06
CLDN20P56880 CNN2P2-201ENST00000443536 909 ntBASIC14.69□□□□□ -0.06
CLDN20P56880 FAM86GP-201ENST00000448322 971 ntBASIC14.69□□□□□ -0.06
CLDN20P56880 CNN2P3-201ENST00000450201 906 ntBASIC14.69□□□□□ -0.06
CLDN20P56880 POU5F1P6-201ENST00000466990 990 ntBASIC14.69□□□□□ -0.06
CLDN20P56880 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN20P56880 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.69□□□□□ -0.06
CLDN20P56880 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.69□□□□□ -0.06
CLDN20P56880 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN20P56880 AL136317.3-201ENST00000618497 906 ntBASIC14.69□□□□□ -0.06
CLDN20P56880 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN20P56880 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CLDN20P56880 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN20P56880 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN20P56880 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
CLDN20P56880 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CLDN20P56880 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN20P56880 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN20P56880 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN20P56880 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN20P56880 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.69□□□□□ -0.06
CLDN20P56880 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN20P56880 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CLDN20P56880 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN20P56880 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN20P56880 TUBB3P1-201ENST00000405796 1332 ntBASIC14.68□□□□□ -0.06
CLDN20P56880 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CLDN20P56880 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN20P56880 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN20P56880 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN20P56880 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN20P56880 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN20P56880 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CLDN20P56880 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN20P56880 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN20P56880 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN20P56880 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN20P56880 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CLDN20P56880 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDN20P56880 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN20P56880 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN20P56880 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN20P56880 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN20P56880 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
CLDN20P56880 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN20P56880 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.68□□□□□ -0.06
CLDN20P56880 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.68□□□□□ -0.06
CLDN20P56880 SPDYE7P-202ENST00000420373 878 ntBASIC14.68□□□□□ -0.06
CLDN20P56880 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.68□□□□□ -0.06
CLDN20P56880 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.68□□□□□ -0.06
CLDN20P56880 CYMP-203ENST00000474680 1263 ntBASIC14.68□□□□□ -0.06
CLDN20P56880 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDN20P56880 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.68□□□□□ -0.06
CLDN20P56880 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.68□□□□□ -0.06
CLDN20P56880 MIR4453-201ENST00000584019 89 ntBASIC14.68□□□□□ -0.06
CLDN20P56880 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.68□□□□□ -0.06
CLDN20P56880 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms