Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC17.5■□□□□ 0.39
BRCA2P51587 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.5■□□□□ 0.39
BRCA2P51587 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
BRCA2P51587 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.5■□□□□ 0.39
BRCA2P51587 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BRCA2P51587 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BRCA2P51587 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.49■□□□□ 0.39
BRCA2P51587 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
BRCA2P51587 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.49■□□□□ 0.39
BRCA2P51587 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.49■□□□□ 0.39
BRCA2P51587 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BRCA2P51587 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
BRCA2P51587 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.49■□□□□ 0.39
BRCA2P51587 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BRCA2P51587 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.49■□□□□ 0.39
BRCA2P51587 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.49■□□□□ 0.39
BRCA2P51587 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BRCA2P51587 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.49■□□□□ 0.39
BRCA2P51587 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.49■□□□□ 0.39
BRCA2P51587 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BRCA2P51587 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BRCA2P51587 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.49■□□□□ 0.39
BRCA2P51587 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BRCA2P51587 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.49■□□□□ 0.39
BRCA2P51587 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.49■□□□□ 0.39
BRCA2P51587 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BRCA2P51587 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BRCA2P51587 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BRCA2P51587 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BRCA2P51587 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.49■□□□□ 0.39
BRCA2P51587 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BRCA2P51587 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BRCA2P51587 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BRCA2P51587 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BRCA2P51587 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BRCA2P51587 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BRCA2P51587 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BRCA2P51587 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
BRCA2P51587 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17.48■□□□□ 0.39
BRCA2P51587 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
BRCA2P51587 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.48■□□□□ 0.39
BRCA2P51587 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BRCA2P51587 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
BRCA2P51587 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
BRCA2P51587 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BRCA2P51587 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BRCA2P51587 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BRCA2P51587 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BRCA2P51587 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BRCA2P51587 RPSAP31-201ENST00000416648 895 ntBASIC17.48■□□□□ 0.39
BRCA2P51587 AC007274.2-201ENST00000421675 662 ntBASIC17.48■□□□□ 0.39
BRCA2P51587 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BRCA2P51587 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BRCA2P51587 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC17.48■□□□□ 0.39
BRCA2P51587 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.48■□□□□ 0.39
BRCA2P51587 PRSS30P-206ENST00000641773 873 ntBASIC17.48■□□□□ 0.39
BRCA2P51587 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.48■□□□□ 0.39
BRCA2P51587 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BRCA2P51587 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
BRCA2P51587 AL645608.8-201ENST00000606034 2086 ntBASIC17.48■□□□□ 0.39
BRCA2P51587 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
BRCA2P51587 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.47■□□□□ 0.39
BRCA2P51587 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC17.47■□□□□ 0.39
BRCA2P51587 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BRCA2P51587 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.47■□□□□ 0.39
BRCA2P51587 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.47■□□□□ 0.39
BRCA2P51587 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BRCA2P51587 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
BRCA2P51587 AC012618.1-201ENST00000461223 412 ntBASIC17.47■□□□□ 0.39
BRCA2P51587 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
BRCA2P51587 AC103988.2-201ENST00000561804 725 ntBASIC17.47■□□□□ 0.39
BRCA2P51587 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BRCA2P51587 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.47■□□□□ 0.39
BRCA2P51587 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BRCA2P51587 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BRCA2P51587 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
BRCA2P51587 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
BRCA2P51587 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BRCA2P51587 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC17.47■□□□□ 0.39
BRCA2P51587 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.47■□□□□ 0.39
BRCA2P51587 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
BRCA2P51587 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC17.47■□□□□ 0.39
BRCA2P51587 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC17.47■□□□□ 0.39
BRCA2P51587 AC022188.1-201ENST00000620960 1664 ntBASIC17.47■□□□□ 0.39
BRCA2P51587 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BRCA2P51587 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRCA2P51587 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.46■□□□□ 0.39
BRCA2P51587 Z97180.1-201ENST00000445173 988 ntBASIC17.46■□□□□ 0.39
BRCA2P51587 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC17.46■□□□□ 0.39
BRCA2P51587 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.46■□□□□ 0.39
BRCA2P51587 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRCA2P51587 AP005019.2-201ENST00000615104 511 ntBASIC17.46■□□□□ 0.39
BRCA2P51587 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
BRCA2P51587 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRCA2P51587 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BRCA2P51587 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRCA2P51587 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.46■□□□□ 0.39
BRCA2P51587 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.46■□□□□ 0.39
BRCA2P51587 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.46■□□□□ 0.39
BRCA2P51587 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms