Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
HLA-DRAP01903 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
HLA-DRAP01903 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
HLA-DRAP01903 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DRAP01903 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.14■□□□□ 0.33
HLA-DRAP01903 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
HLA-DRAP01903 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HLA-DRAP01903 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DRAP01903 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DRAP01903 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DRAP01903 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DRAP01903 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
HLA-DRAP01903 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.14■□□□□ 0.33
HLA-DRAP01903 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DRAP01903 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HLA-DRAP01903 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.14■□□□□ 0.33
HLA-DRAP01903 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.14■□□□□ 0.33
HLA-DRAP01903 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.14■□□□□ 0.33
HLA-DRAP01903 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.14■□□□□ 0.33
HLA-DRAP01903 SERBP1P3-201ENST00000459980 809 ntBASIC17.14■□□□□ 0.33
HLA-DRAP01903 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.14■□□□□ 0.33
HLA-DRAP01903 IGHV3-42-201ENST00000520410 361 ntBASIC17.14■□□□□ 0.33
HLA-DRAP01903 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DRAP01903 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.14■□□□□ 0.33
HLA-DRAP01903 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
HLA-DRAP01903 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.14■□□□□ 0.33
HLA-DRAP01903 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DRAP01903 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.14■□□□□ 0.33
HLA-DRAP01903 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.14■□□□□ 0.33
HLA-DRAP01903 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DRAP01903 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DRAP01903 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HLA-DRAP01903 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
HLA-DRAP01903 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DRAP01903 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DRAP01903 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
HLA-DRAP01903 AC100757.3-201ENST00000622361 1406 ntBASIC17.13■□□□□ 0.33
HLA-DRAP01903 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DRAP01903 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DRAP01903 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DRAP01903 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DRAP01903 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DRAP01903 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DRAP01903 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
HLA-DRAP01903 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DRAP01903 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DRAP01903 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
HLA-DRAP01903 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DRAP01903 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DRAP01903 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DRAP01903 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
HLA-DRAP01903 AC136604.1-201ENST00000418535 575 ntBASIC17.13■□□□□ 0.33
HLA-DRAP01903 AC055876.3-201ENST00000431496 288 ntBASIC17.13■□□□□ 0.33
HLA-DRAP01903 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DRAP01903 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DRAP01903 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DRAP01903 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DRAP01903 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DRAP01903 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.13■□□□□ 0.33
HLA-DRAP01903 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DRAP01903 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.13■□□□□ 0.33
HLA-DRAP01903 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.13■□□□□ 0.33
HLA-DRAP01903 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.13■□□□□ 0.33
HLA-DRAP01903 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.13■□□□□ 0.33
HLA-DRAP01903 AL390955.2-201ENST00000603032 514 ntBASIC17.13■□□□□ 0.33
HLA-DRAP01903 AC138649.4-201ENST00000612222 287 ntBASIC17.13■□□□□ 0.33
HLA-DRAP01903 MIR6069-201ENST00000620069 79 ntBASIC17.13■□□□□ 0.33
HLA-DRAP01903 AL590560.3-201ENST00000623350 461 ntBASIC17.13■□□□□ 0.33
HLA-DRAP01903 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.13■□□□□ 0.33
HLA-DRAP01903 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.13■□□□□ 0.33
HLA-DRAP01903 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DRAP01903 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DRAP01903 CICP13-201ENST00000422015 2789 ntBASIC17.13■□□□□ 0.33
HLA-DRAP01903 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.13■□□□□ 0.33
HLA-DRAP01903 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DRAP01903 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DRAP01903 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DRAP01903 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.13■□□□□ 0.33
HLA-DRAP01903 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DRAP01903 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DRAP01903 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HLA-DRAP01903 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DRAP01903 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DRAP01903 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-DRAP01903 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DRAP01903 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DRAP01903 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DRAP01903 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DRAP01903 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-DRAP01903 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DRAP01903 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DRAP01903 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.12■□□□□ 0.33
HLA-DRAP01903 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.12■□□□□ 0.33
HLA-DRAP01903 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DRAP01903 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.12■□□□□ 0.33
HLA-DRAP01903 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.12■□□□□ 0.33
HLA-DRAP01903 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
HLA-DRAP01903 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.12■□□□□ 0.33
HLA-DRAP01903 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.12■□□□□ 0.33
HLA-DRAP01903 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms