Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.1■□□□□ 0.17
GPC4O75487 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.1■□□□□ 0.17
GPC4O75487 SPDYE10P-202ENST00000612005 668 ntBASIC16.1■□□□□ 0.17
GPC4O75487 SPDYE8P-202ENST00000612377 668 ntBASIC16.1■□□□□ 0.17
GPC4O75487 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.1■□□□□ 0.17
GPC4O75487 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.1■□□□□ 0.17
GPC4O75487 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
GPC4O75487 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
GPC4O75487 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GPC4O75487 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GPC4O75487 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GPC4O75487 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
GPC4O75487 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
GPC4O75487 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
GPC4O75487 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GPC4O75487 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GPC4O75487 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
GPC4O75487 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GPC4O75487 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GPC4O75487 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
GPC4O75487 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GPC4O75487 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GPC4O75487 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.1■□□□□ 0.17
GPC4O75487 AP002414.2-201ENST00000591780 3365 ntBASIC16.1■□□□□ 0.17
GPC4O75487 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.1■□□□□ 0.17
GPC4O75487 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GPC4O75487 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
GPC4O75487 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GPC4O75487 AC092850.2-201ENST00000623821 2697 ntBASIC16.1■□□□□ 0.17
GPC4O75487 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
GPC4O75487 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
GPC4O75487 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
GPC4O75487 AL592424.1-201ENST00000563624 1536 ntBASIC16.09■□□□□ 0.17
GPC4O75487 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.09■□□□□ 0.17
GPC4O75487 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GPC4O75487 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GPC4O75487 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.09■□□□□ 0.17
GPC4O75487 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.09■□□□□ 0.17
GPC4O75487 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GPC4O75487 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GPC4O75487 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GPC4O75487 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
GPC4O75487 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
GPC4O75487 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
GPC4O75487 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GPC4O75487 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GPC4O75487 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
GPC4O75487 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GPC4O75487 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GPC4O75487 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.09■□□□□ 0.17
GPC4O75487 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
GPC4O75487 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.09■□□□□ 0.17
GPC4O75487 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
GPC4O75487 SPCS2P4-201ENST00000436160 681 ntBASIC16.09■□□□□ 0.17
GPC4O75487 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.09■□□□□ 0.17
GPC4O75487 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.09■□□□□ 0.17
GPC4O75487 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GPC4O75487 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
GPC4O75487 AC079140.1-201ENST00000508039 487 ntBASIC16.09■□□□□ 0.17
GPC4O75487 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.09■□□□□ 0.17
GPC4O75487 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.09■□□□□ 0.17
GPC4O75487 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GPC4O75487 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.09■□□□□ 0.17
GPC4O75487 AC027307.2-201ENST00000591252 911 ntBASIC16.09■□□□□ 0.17
GPC4O75487 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.09■□□□□ 0.17
GPC4O75487 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.09■□□□□ 0.17
GPC4O75487 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
GPC4O75487 AC105339.1-204ENST00000636249 355 ntBASIC16.09■□□□□ 0.17
GPC4O75487 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
GPC4O75487 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
GPC4O75487 U82695.1-201ENST00000635752 1889 ntBASIC16.09■□□□□ 0.17
GPC4O75487 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.09■□□□□ 0.17
GPC4O75487 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.09■□□□□ 0.17
GPC4O75487 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.09■□□□□ 0.17
GPC4O75487 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
GPC4O75487 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.09■□□□□ 0.17
GPC4O75487 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.09■□□□□ 0.17
GPC4O75487 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GPC4O75487 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.09■□□□□ 0.17
GPC4O75487 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GPC4O75487 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.09■□□□□ 0.17
GPC4O75487 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GPC4O75487 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GPC4O75487 AC104640.1-201ENST00000562617 2109 ntBASIC16.09■□□□□ 0.17
GPC4O75487 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
GPC4O75487 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GPC4O75487 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GPC4O75487 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
GPC4O75487 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.09■□□□□ 0.17
GPC4O75487 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
GPC4O75487 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.08■□□□□ 0.17
GPC4O75487 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
GPC4O75487 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
GPC4O75487 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
GPC4O75487 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
GPC4O75487 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.08■□□□□ 0.17
GPC4O75487 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
GPC4O75487 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GPC4O75487 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
GPC4O75487 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms