Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMPCBO75439 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMPCBO75439 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.25■□□□□ 0.19
PMPCBO75439 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PMPCBO75439 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMPCBO75439 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PMPCBO75439 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PMPCBO75439 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMPCBO75439 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMPCBO75439 AC004987.2-201ENST00000395959 1148 ntBASIC16.25■□□□□ 0.19
PMPCBO75439 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.25■□□□□ 0.19
PMPCBO75439 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.25■□□□□ 0.19
PMPCBO75439 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.25■□□□□ 0.19
PMPCBO75439 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.25■□□□□ 0.19
PMPCBO75439 AC105021.1-202ENST00000570572 669 ntBASIC16.25■□□□□ 0.19
PMPCBO75439 MIR4453-201ENST00000584019 89 ntBASIC16.25■□□□□ 0.19
PMPCBO75439 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.25■□□□□ 0.19
PMPCBO75439 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.25■□□□□ 0.19
PMPCBO75439 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMPCBO75439 AP001059.3-201ENST00000619053 235 ntBASIC16.25■□□□□ 0.19
PMPCBO75439 LINC00628-201ENST00000628516 1289 ntBASIC16.25■□□□□ 0.19
PMPCBO75439 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.25■□□□□ 0.19
PMPCBO75439 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.25■□□□□ 0.19
PMPCBO75439 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PMPCBO75439 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMPCBO75439 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.25■□□□□ 0.19
PMPCBO75439 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.25■□□□□ 0.19
PMPCBO75439 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMPCBO75439 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PMPCBO75439 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMPCBO75439 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMPCBO75439 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PMPCBO75439 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PMPCBO75439 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMPCBO75439 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PMPCBO75439 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PMPCBO75439 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMPCBO75439 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PMPCBO75439 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PMPCBO75439 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.25■□□□□ 0.19
PMPCBO75439 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PMPCBO75439 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMPCBO75439 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.25■□□□□ 0.19
PMPCBO75439 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PMPCBO75439 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PMPCBO75439 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMPCBO75439 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.24■□□□□ 0.19
PMPCBO75439 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PMPCBO75439 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMPCBO75439 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PMPCBO75439 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
PMPCBO75439 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMPCBO75439 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PMPCBO75439 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PMPCBO75439 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.24■□□□□ 0.19
PMPCBO75439 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMPCBO75439 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMPCBO75439 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMPCBO75439 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMPCBO75439 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.24■□□□□ 0.19
PMPCBO75439 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PMPCBO75439 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.24■□□□□ 0.19
PMPCBO75439 AC109322.1-201ENST00000524499 1264 ntBASIC16.24■□□□□ 0.19
PMPCBO75439 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.24■□□□□ 0.19
PMPCBO75439 BANF1P1-201ENST00000553684 263 ntBASIC16.24■□□□□ 0.19
PMPCBO75439 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
PMPCBO75439 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.24■□□□□ 0.19
PMPCBO75439 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.24■□□□□ 0.19
PMPCBO75439 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.24■□□□□ 0.19
PMPCBO75439 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PMPCBO75439 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.24■□□□□ 0.19
PMPCBO75439 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMPCBO75439 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMPCBO75439 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMPCBO75439 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMPCBO75439 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
PMPCBO75439 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMPCBO75439 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.24■□□□□ 0.19
PMPCBO75439 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMPCBO75439 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.24■□□□□ 0.19
PMPCBO75439 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMPCBO75439 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PMPCBO75439 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PMPCBO75439 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PMPCBO75439 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.23■□□□□ 0.19
PMPCBO75439 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PMPCBO75439 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PMPCBO75439 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.23■□□□□ 0.19
PMPCBO75439 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PMPCBO75439 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.23■□□□□ 0.19
PMPCBO75439 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PMPCBO75439 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.23■□□□□ 0.19
PMPCBO75439 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.23■□□□□ 0.19
PMPCBO75439 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PMPCBO75439 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PMPCBO75439 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PMPCBO75439 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PMPCBO75439 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PMPCBO75439 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PMPCBO75439 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms