Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ZIC3O60481 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ZIC3O60481 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC3O60481 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC3O60481 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC3O60481 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC3O60481 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.32□□□□□ -0.12
ZIC3O60481 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.32□□□□□ -0.12
ZIC3O60481 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.32□□□□□ -0.12
ZIC3O60481 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC3O60481 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC3O60481 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZIC3O60481 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.32□□□□□ -0.12
ZIC3O60481 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC3O60481 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC3O60481 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC3O60481 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
ZIC3O60481 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC3O60481 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
ZIC3O60481 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC3O60481 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC3O60481 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.31□□□□□ -0.12
ZIC3O60481 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC3O60481 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
ZIC3O60481 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.31□□□□□ -0.12
ZIC3O60481 AL365203.3-201ENST00000609742 2057 ntBASIC14.31□□□□□ -0.12
ZIC3O60481 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC3O60481 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC3O60481 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC3O60481 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC3O60481 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.31□□□□□ -0.12
ZIC3O60481 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.31□□□□□ -0.12
ZIC3O60481 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
ZIC3O60481 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC3O60481 MEIS3P1-201ENST00000495167 958 ntBASIC14.31□□□□□ -0.12
ZIC3O60481 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.31□□□□□ -0.12
ZIC3O60481 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC3O60481 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC3O60481 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
ZIC3O60481 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
ZIC3O60481 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC3O60481 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC3O60481 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC3O60481 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
ZIC3O60481 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC3O60481 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC3O60481 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.31□□□□□ -0.12
ZIC3O60481 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
ZIC3O60481 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC3O60481 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC3O60481 AC007541.1-201ENST00000570282 1469 ntBASIC14.31□□□□□ -0.12
ZIC3O60481 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC3O60481 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC3O60481 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC3O60481 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.31□□□□□ -0.12
ZIC3O60481 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC3O60481 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
ZIC3O60481 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZIC3O60481 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC3O60481 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
ZIC3O60481 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ZIC3O60481 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC3O60481 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.3□□□□□ -0.12
ZIC3O60481 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ZIC3O60481 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC3O60481 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC3O60481 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC3O60481 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
ZIC3O60481 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC3O60481 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
ZIC3O60481 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC3O60481 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC3O60481 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC3O60481 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC3O60481 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC3O60481 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.3□□□□□ -0.12
ZIC3O60481 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC3O60481 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC3O60481 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC3O60481 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
ZIC3O60481 AL353779.1-201ENST00000434793 351 ntBASIC14.3□□□□□ -0.12
ZIC3O60481 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.3□□□□□ -0.12
ZIC3O60481 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC3O60481 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.3□□□□□ -0.12
ZIC3O60481 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.3□□□□□ -0.12
ZIC3O60481 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC3O60481 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
ZIC3O60481 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.3□□□□□ -0.12
ZIC3O60481 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
ZIC3O60481 AC023310.3-201ENST00000557027 670 ntBASIC14.3□□□□□ -0.12
ZIC3O60481 AC100756.1-201ENST00000562736 682 ntBASIC14.3□□□□□ -0.12
ZIC3O60481 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.3□□□□□ -0.12
ZIC3O60481 AC138749.3-201ENST00000567691 622 ntBASIC14.3□□□□□ -0.12
ZIC3O60481 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.3□□□□□ -0.12
ZIC3O60481 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.3□□□□□ -0.12
ZIC3O60481 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC3O60481 AC116165.1-201ENST00000611806 668 ntBASIC14.3□□□□□ -0.12
ZIC3O60481 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC3O60481 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZIC3O60481 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms