Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.44□□□□□ -0.42
PDE6DO43924 HOMER2P1-201ENST00000455653 964 ntBASIC12.44□□□□□ -0.42
PDE6DO43924 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC12.44□□□□□ -0.42
PDE6DO43924 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC12.44□□□□□ -0.42
PDE6DO43924 AL160237.2-201ENST00000556165 472 ntBASIC12.44□□□□□ -0.42
PDE6DO43924 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC12.44□□□□□ -0.42
PDE6DO43924 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC12.44□□□□□ -0.42
PDE6DO43924 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.44□□□□□ -0.42
PDE6DO43924 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC12.44□□□□□ -0.42
PDE6DO43924 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
PDE6DO43924 AC041040.2-201ENST00000622926 2899 ntBASIC12.44□□□□□ -0.42
PDE6DO43924 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.44□□□□□ -0.42
PDE6DO43924 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
PDE6DO43924 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.44□□□□□ -0.42
PDE6DO43924 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC12.44□□□□□ -0.42
PDE6DO43924 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
PDE6DO43924 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.44□□□□□ -0.42
PDE6DO43924 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.44□□□□□ -0.42
PDE6DO43924 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
PDE6DO43924 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
PDE6DO43924 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.44□□□□□ -0.42
PDE6DO43924 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
PDE6DO43924 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.44□□□□□ -0.42
PDE6DO43924 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PDE6DO43924 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC12.43□□□□□ -0.42
PDE6DO43924 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.43□□□□□ -0.42
PDE6DO43924 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
PDE6DO43924 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.43□□□□□ -0.42
PDE6DO43924 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC12.43□□□□□ -0.42
PDE6DO43924 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC12.43□□□□□ -0.42
PDE6DO43924 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.43□□□□□ -0.42
PDE6DO43924 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
PDE6DO43924 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.43□□□□□ -0.42
PDE6DO43924 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
PDE6DO43924 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.43□□□□□ -0.42
PDE6DO43924 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
PDE6DO43924 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 AL137784.3-201ENST00000623858 2288 ntBASIC12.43□□□□□ -0.42
PDE6DO43924 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.43□□□□□ -0.42
PDE6DO43924 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.43□□□□□ -0.42
PDE6DO43924 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 SOD2-201ENST00000337404 991 ntTSL 2 BASIC12.43□□□□□ -0.42
PDE6DO43924 HCG4-201ENST00000418983 998 ntBASIC12.43□□□□□ -0.42
PDE6DO43924 PMS2P1-201ENST00000431037 1228 ntBASIC12.43□□□□□ -0.42
PDE6DO43924 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC12.43□□□□□ -0.42
PDE6DO43924 ABR-204ENST00000543210 1049 ntTSL 2 BASIC12.43□□□□□ -0.42
PDE6DO43924 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC12.43□□□□□ -0.42
PDE6DO43924 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.43□□□□□ -0.42
PDE6DO43924 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC12.43□□□□□ -0.42
PDE6DO43924 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC12.43□□□□□ -0.42
PDE6DO43924 ABR-217ENST00000572441 563 ntTSL 4 BASIC12.43□□□□□ -0.42
PDE6DO43924 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.43□□□□□ -0.42
PDE6DO43924 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC12.43□□□□□ -0.42
PDE6DO43924 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC12.43□□□□□ -0.42
PDE6DO43924 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC12.43□□□□□ -0.42
PDE6DO43924 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
PDE6DO43924 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 SLC9A3P2-201ENST00000447821 2021 ntBASIC12.43□□□□□ -0.42
PDE6DO43924 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
PDE6DO43924 NCF1C-201ENST00000438382 1427 ntBASIC12.43□□□□□ -0.42
PDE6DO43924 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.43□□□□□ -0.42
PDE6DO43924 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
PDE6DO43924 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms