Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
NDUFA1O15239 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
NDUFA1O15239 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC10.99□□□□□ -0.65
NDUFA1O15239 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NDUFA1O15239 DFFB-203ENST00000341385 572 ntTSL 5 BASIC10.99□□□□□ -0.65
NDUFA1O15239 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NDUFA1O15239 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC10.99□□□□□ -0.65
NDUFA1O15239 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC10.99□□□□□ -0.65
NDUFA1O15239 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC10.99□□□□□ -0.65
NDUFA1O15239 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC10.99□□□□□ -0.65
NDUFA1O15239 FGFR3P6-201ENST00000457012 610 ntBASIC10.99□□□□□ -0.65
NDUFA1O15239 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
NDUFA1O15239 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
NDUFA1O15239 SART3-203ENST00000546611 1184 ntBASIC10.99□□□□□ -0.65
NDUFA1O15239 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC10.99□□□□□ -0.65
NDUFA1O15239 PRR29-207ENST00000580752 458 ntTSL 3 BASIC10.99□□□□□ -0.65
NDUFA1O15239 CYP2A7P1-201ENST00000595391 815 ntBASIC10.99□□□□□ -0.65
NDUFA1O15239 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
NDUFA1O15239 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC10.99□□□□□ -0.65
NDUFA1O15239 AL359258.3-201ENST00000622910 2331 ntBASIC10.99□□□□□ -0.65
NDUFA1O15239 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
NDUFA1O15239 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
NDUFA1O15239 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC10.99□□□□□ -0.65
NDUFA1O15239 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NDUFA1O15239 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NDUFA1O15239 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NDUFA1O15239 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
NDUFA1O15239 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
NDUFA1O15239 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
NDUFA1O15239 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
NDUFA1O15239 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NDUFA1O15239 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC10.99□□□□□ -0.65
NDUFA1O15239 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
NDUFA1O15239 AC232323.1-201ENST00000540724 2099 ntBASIC10.99□□□□□ -0.65
NDUFA1O15239 REXO1L5P-201ENST00000622260 2098 ntBASIC10.99□□□□□ -0.65
NDUFA1O15239 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NDUFA1O15239 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
NDUFA1O15239 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NDUFA1O15239 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
NDUFA1O15239 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
NDUFA1O15239 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NDUFA1O15239 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
NDUFA1O15239 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC10.99□□□□□ -0.65
NDUFA1O15239 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
NDUFA1O15239 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC10.99□□□□□ -0.65
NDUFA1O15239 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
NDUFA1O15239 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
NDUFA1O15239 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
NDUFA1O15239 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC10.98□□□□□ -0.65
NDUFA1O15239 AC013726.1-201ENST00000563747 2285 ntBASIC10.98□□□□□ -0.65
NDUFA1O15239 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
NDUFA1O15239 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
NDUFA1O15239 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
NDUFA1O15239 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
NDUFA1O15239 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
NDUFA1O15239 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
NDUFA1O15239 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC10.98□□□□□ -0.65
NDUFA1O15239 PARN-202ENST00000420015 2360 ntTSL 2 BASIC10.98□□□□□ -0.65
NDUFA1O15239 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
NDUFA1O15239 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
NDUFA1O15239 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC10.98□□□□□ -0.65
NDUFA1O15239 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC10.98□□□□□ -0.65
NDUFA1O15239 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
NDUFA1O15239 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
NDUFA1O15239 GPI-205ENST00000586425 1799 ntTSL 5 BASIC10.98□□□□□ -0.65
NDUFA1O15239 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
NDUFA1O15239 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
NDUFA1O15239 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
NDUFA1O15239 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
NDUFA1O15239 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
NDUFA1O15239 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
NDUFA1O15239 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
NDUFA1O15239 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
NDUFA1O15239 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
NDUFA1O15239 AL390755.1-201ENST00000623716 2027 ntBASIC10.98□□□□□ -0.65
NDUFA1O15239 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
NDUFA1O15239 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC10.98□□□□□ -0.65
NDUFA1O15239 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
NDUFA1O15239 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
NDUFA1O15239 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
NDUFA1O15239 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
NDUFA1O15239 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC10.98□□□□□ -0.65
NDUFA1O15239 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC10.98□□□□□ -0.65
NDUFA1O15239 R3HDM2P2-201ENST00000401880 2116 ntBASIC10.98□□□□□ -0.65
NDUFA1O15239 SAPCD2P3-201ENST00000455031 850 ntBASIC10.98□□□□□ -0.65
NDUFA1O15239 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC10.98□□□□□ -0.65
NDUFA1O15239 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
NDUFA1O15239 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC10.98□□□□□ -0.65
NDUFA1O15239 RPS15-207ENST00000591032 550 ntTSL 3 BASIC10.98□□□□□ -0.65
NDUFA1O15239 RPS15-212ENST00000593052 629 ntTSL 2 BASIC10.98□□□□□ -0.65
NDUFA1O15239 BSG-214ENST00000614867 960 ntTSL 3 BASIC10.98□□□□□ -0.65
NDUFA1O15239 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC10.98□□□□□ -0.65
NDUFA1O15239 MIR1199-201ENST00000621445 119 ntBASIC10.98□□□□□ -0.65
NDUFA1O15239 REXO1L3P-201ENST00000622202 1288 ntBASIC10.98□□□□□ -0.65
NDUFA1O15239 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC10.98□□□□□ -0.65
NDUFA1O15239 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
NDUFA1O15239 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
NDUFA1O15239 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
NDUFA1O15239 AC129492.6-201ENST00000611383 1305 ntBASIC10.98□□□□□ -0.65
NDUFA1O15239 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms