Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN9O14815 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN9O14815 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN9O14815 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN9O14815 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.94■□□□□ 0.3
CAPN9O14815 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN9O14815 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.94■□□□□ 0.3
CAPN9O14815 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.94■□□□□ 0.3
CAPN9O14815 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.94■□□□□ 0.3
CAPN9O14815 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN9O14815 TUBB3P1-201ENST00000405796 1332 ntBASIC16.94■□□□□ 0.3
CAPN9O14815 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN9O14815 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN9O14815 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CAPN9O14815 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CAPN9O14815 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN9O14815 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.93■□□□□ 0.3
CAPN9O14815 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN9O14815 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN9O14815 AL136379.1-201ENST00000623471 2642 ntBASIC16.93■□□□□ 0.3
CAPN9O14815 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.93■□□□□ 0.3
CAPN9O14815 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CAPN9O14815 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN9O14815 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CAPN9O14815 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN9O14815 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN9O14815 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CAPN9O14815 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.93■□□□□ 0.3
CAPN9O14815 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN9O14815 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN9O14815 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CAPN9O14815 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.93■□□□□ 0.3
CAPN9O14815 HAUS4P1-201ENST00000406739 1145 ntBASIC16.93■□□□□ 0.3
CAPN9O14815 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN9O14815 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.93■□□□□ 0.3
CAPN9O14815 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.93■□□□□ 0.3
CAPN9O14815 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.93■□□□□ 0.3
CAPN9O14815 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CAPN9O14815 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.93■□□□□ 0.3
CAPN9O14815 AC067863.1-201ENST00000494933 530 ntBASIC16.93■□□□□ 0.3
CAPN9O14815 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
CAPN9O14815 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.93■□□□□ 0.3
CAPN9O14815 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.93■□□□□ 0.3
CAPN9O14815 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.93■□□□□ 0.3
CAPN9O14815 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.93■□□□□ 0.3
CAPN9O14815 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CAPN9O14815 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.93■□□□□ 0.3
CAPN9O14815 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN9O14815 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN9O14815 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.93■□□□□ 0.3
CAPN9O14815 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.93■□□□□ 0.3
CAPN9O14815 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN9O14815 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN9O14815 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN9O14815 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN9O14815 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN9O14815 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN9O14815 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.92■□□□□ 0.3
CAPN9O14815 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN9O14815 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN9O14815 AC067930.6-201ENST00000623257 4947 ntBASIC16.92■□□□□ 0.3
CAPN9O14815 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN9O14815 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
CAPN9O14815 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN9O14815 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN9O14815 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CAPN9O14815 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.92■□□□□ 0.3
CAPN9O14815 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CAPN9O14815 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CAPN9O14815 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN9O14815 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN9O14815 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN9O14815 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN9O14815 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN9O14815 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CAPN9O14815 MIR648-201ENST00000385046 94 ntBASIC16.92■□□□□ 0.3
CAPN9O14815 AL035633.1-201ENST00000406139 838 ntBASIC16.92■□□□□ 0.3
CAPN9O14815 AL645939.2-201ENST00000427340 991 ntBASIC16.92■□□□□ 0.3
CAPN9O14815 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.92■□□□□ 0.3
CAPN9O14815 COX20P2-201ENST00000452636 358 ntBASIC16.92■□□□□ 0.3
CAPN9O14815 AL139010.1-201ENST00000454878 894 ntBASIC16.92■□□□□ 0.3
CAPN9O14815 AC125807.1-201ENST00000483097 614 ntBASIC16.92■□□□□ 0.3
CAPN9O14815 AC007967.4-201ENST00000614700 386 ntBASIC16.92■□□□□ 0.3
CAPN9O14815 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN9O14815 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.92■□□□□ 0.3
CAPN9O14815 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.92■□□□□ 0.3
CAPN9O14815 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.92■□□□□ 0.3
CAPN9O14815 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CAPN9O14815 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.92■□□□□ 0.3
CAPN9O14815 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CAPN9O14815 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN9O14815 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN9O14815 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CAPN9O14815 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN9O14815 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.92■□□□□ 0.3
CAPN9O14815 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
CAPN9O14815 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CAPN9O14815 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.92■□□□□ 0.3
CAPN9O14815 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.92■□□□□ 0.3
CAPN9O14815 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms