Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC26.92■■□□□ 1.9
PTCH2Q9Y6C5 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
PTCH2Q9Y6C5 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
PTCH2Q9Y6C5 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PTCH2Q9Y6C5 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
PTCH2Q9Y6C5 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC26.91■■□□□ 1.9
PTCH2Q9Y6C5 SNX5-217ENST00000606557 1087 ntBASIC26.91■■□□□ 1.9
PTCH2Q9Y6C5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.91■■□□□ 1.9
PTCH2Q9Y6C5 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC26.91■■□□□ 1.9
PTCH2Q9Y6C5 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
PTCH2Q9Y6C5 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
PTCH2Q9Y6C5 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PTCH2Q9Y6C5 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PTCH2Q9Y6C5 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
PTCH2Q9Y6C5 MIR6722-201ENST00000617286 78 ntBASIC26.9■■□□□ 1.9
PTCH2Q9Y6C5 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PTCH2Q9Y6C5 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
PTCH2Q9Y6C5 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
PTCH2Q9Y6C5 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
PTCH2Q9Y6C5 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
PTCH2Q9Y6C5 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PTCH2Q9Y6C5 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.89■■□□□ 1.9
PTCH2Q9Y6C5 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PTCH2Q9Y6C5 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
PTCH2Q9Y6C5 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PTCH2Q9Y6C5 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PTCH2Q9Y6C5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PTCH2Q9Y6C5 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PTCH2Q9Y6C5 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
PTCH2Q9Y6C5 AC091305.1-201ENST00000479476 895 ntBASIC26.87■■□□□ 1.89
PTCH2Q9Y6C5 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.87■■□□□ 1.89
PTCH2Q9Y6C5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
PTCH2Q9Y6C5 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
PTCH2Q9Y6C5 AC090192.1-201ENST00000517740 490 ntBASIC26.86■■□□□ 1.89
PTCH2Q9Y6C5 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC26.86■■□□□ 1.89
PTCH2Q9Y6C5 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
PTCH2Q9Y6C5 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
PTCH2Q9Y6C5 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
PTCH2Q9Y6C5 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.85■■□□□ 1.89
PTCH2Q9Y6C5 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
PTCH2Q9Y6C5 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
PTCH2Q9Y6C5 GATM-206ENST00000558336 1522 ntTSL 2 BASIC26.84■■□□□ 1.89
PTCH2Q9Y6C5 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PTCH2Q9Y6C5 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PTCH2Q9Y6C5 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.83■■□□□ 1.89
PTCH2Q9Y6C5 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.83■■□□□ 1.89
PTCH2Q9Y6C5 RARRES2P11-201ENST00000635158 484 ntBASIC26.83■■□□□ 1.89
PTCH2Q9Y6C5 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.82■■□□□ 1.88
PTCH2Q9Y6C5 AC139426.1-201ENST00000568218 2529 ntBASIC26.82■■□□□ 1.88
PTCH2Q9Y6C5 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.82■■□□□ 1.88
PTCH2Q9Y6C5 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PTCH2Q9Y6C5 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PTCH2Q9Y6C5 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
PTCH2Q9Y6C5 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
PTCH2Q9Y6C5 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PTCH2Q9Y6C5 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PTCH2Q9Y6C5 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC26.81■■□□□ 1.88
PTCH2Q9Y6C5 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PTCH2Q9Y6C5 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
PTCH2Q9Y6C5 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PTCH2Q9Y6C5 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PTCH2Q9Y6C5 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
PTCH2Q9Y6C5 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PTCH2Q9Y6C5 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PTCH2Q9Y6C5 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
PTCH2Q9Y6C5 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC26.8■■□□□ 1.88
PTCH2Q9Y6C5 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
PTCH2Q9Y6C5 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.8■■□□□ 1.88
PTCH2Q9Y6C5 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.8■■□□□ 1.88
PTCH2Q9Y6C5 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PTCH2Q9Y6C5 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PTCH2Q9Y6C5 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PTCH2Q9Y6C5 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PTCH2Q9Y6C5 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC26.79■■□□□ 1.88
PTCH2Q9Y6C5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.79■■□□□ 1.88
PTCH2Q9Y6C5 CA15P2-201ENST00000611168 834 ntBASIC26.79■■□□□ 1.88
PTCH2Q9Y6C5 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.78■■□□□ 1.88
PTCH2Q9Y6C5 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.78■■□□□ 1.88
PTCH2Q9Y6C5 AC004448.1-201ENST00000458332 883 ntBASIC26.78■■□□□ 1.88
PTCH2Q9Y6C5 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.78■■□□□ 1.88
PTCH2Q9Y6C5 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PTCH2Q9Y6C5 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PTCH2Q9Y6C5 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.78■■□□□ 1.88
PTCH2Q9Y6C5 MIR4767-201ENST00000582827 78 ntBASIC26.77■■□□□ 1.88
PTCH2Q9Y6C5 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.88
PTCH2Q9Y6C5 AC142472.1-201ENST00000612013 1741 ntBASIC26.76■■□□□ 1.88
PTCH2Q9Y6C5 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
PTCH2Q9Y6C5 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC26.76■■□□□ 1.87
PTCH2Q9Y6C5 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
PTCH2Q9Y6C5 DUX4L19-201ENST00000557448 1267 ntBASIC26.76■■□□□ 1.87
PTCH2Q9Y6C5 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
PTCH2Q9Y6C5 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.75■■□□□ 1.87
PTCH2Q9Y6C5 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
PTCH2Q9Y6C5 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.75■■□□□ 1.87
PTCH2Q9Y6C5 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
PTCH2Q9Y6C5 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC26.75■■□□□ 1.87
PTCH2Q9Y6C5 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC26.75■■□□□ 1.87
PTCH2Q9Y6C5 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC26.74■■□□□ 1.87
PTCH2Q9Y6C5 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC26.74■■□□□ 1.87
PTCH2Q9Y6C5 SF1-220ENST00000626028 704 ntTSL 2 BASIC26.74■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms