Protein–RNA interactions for Protein: Q9Y5G8

PCDHGA5, Protocadherin gamma-A5, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA5Q9Y5G8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGA5Q9Y5G8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGA5Q9Y5G8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGA5Q9Y5G8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.33■■□□□ 1.33
PCDHGA5Q9Y5G8 AC105265.2-201ENST00000467189 838 ntBASIC23.33■■□□□ 1.33
PCDHGA5Q9Y5G8 AC024257.2-201ENST00000549699 147 ntBASIC23.33■■□□□ 1.33
PCDHGA5Q9Y5G8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.33■■□□□ 1.33
PCDHGA5Q9Y5G8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
PCDHGA5Q9Y5G8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
PCDHGA5Q9Y5G8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.32■■□□□ 1.32
PCDHGA5Q9Y5G8 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGA5Q9Y5G8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGA5Q9Y5G8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.32■■□□□ 1.32
PCDHGA5Q9Y5G8 SNX5-217ENST00000606557 1087 ntBASIC23.32■■□□□ 1.32
PCDHGA5Q9Y5G8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
PCDHGA5Q9Y5G8 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGA5Q9Y5G8 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGA5Q9Y5G8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGA5Q9Y5G8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGA5Q9Y5G8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDHGA5Q9Y5G8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGA5Q9Y5G8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.31■■□□□ 1.32
PCDHGA5Q9Y5G8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGA5Q9Y5G8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHGA5Q9Y5G8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHGA5Q9Y5G8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.3■■□□□ 1.32
PCDHGA5Q9Y5G8 MIR6821-201ENST00000617625 74 ntBASIC23.3■■□□□ 1.32
PCDHGA5Q9Y5G8 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA5Q9Y5G8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA5Q9Y5G8 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA5Q9Y5G8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGA5Q9Y5G8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGA5Q9Y5G8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGA5Q9Y5G8 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.29■■□□□ 1.32
PCDHGA5Q9Y5G8 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.29■■□□□ 1.32
PCDHGA5Q9Y5G8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGA5Q9Y5G8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGA5Q9Y5G8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.28■■□□□ 1.32
PCDHGA5Q9Y5G8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGA5Q9Y5G8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.28■■□□□ 1.32
PCDHGA5Q9Y5G8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
PCDHGA5Q9Y5G8 AL136967.2-201ENST00000623968 743 ntBASIC23.28■■□□□ 1.32
PCDHGA5Q9Y5G8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGA5Q9Y5G8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGA5Q9Y5G8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGA5Q9Y5G8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDHGA5Q9Y5G8 LINC01003-201ENST00000564834 1764 ntBASIC23.27■■□□□ 1.32
PCDHGA5Q9Y5G8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGA5Q9Y5G8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDHGA5Q9Y5G8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGA5Q9Y5G8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
PCDHGA5Q9Y5G8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
PCDHGA5Q9Y5G8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
PCDHGA5Q9Y5G8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGA5Q9Y5G8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGA5Q9Y5G8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
PCDHGA5Q9Y5G8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGA5Q9Y5G8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGA5Q9Y5G8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
PCDHGA5Q9Y5G8 DUX4L19-201ENST00000557448 1267 ntBASIC23.26■■□□□ 1.31
PCDHGA5Q9Y5G8 DRD5P2-201ENST00000421395 2012 ntBASIC23.26■■□□□ 1.31
PCDHGA5Q9Y5G8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGA5Q9Y5G8 MIR939-201ENST00000401314 82 ntBASIC23.25■■□□□ 1.31
PCDHGA5Q9Y5G8 AC097381.1-201ENST00000429019 1296 ntBASIC23.25■■□□□ 1.31
PCDHGA5Q9Y5G8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGA5Q9Y5G8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDHGA5Q9Y5G8 AF213884.3-201ENST00000563833 479 ntBASIC23.25■■□□□ 1.31
PCDHGA5Q9Y5G8 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.25■■□□□ 1.31
PCDHGA5Q9Y5G8 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDHGA5Q9Y5G8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGA5Q9Y5G8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
PCDHGA5Q9Y5G8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
PCDHGA5Q9Y5G8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.24■■□□□ 1.31
PCDHGA5Q9Y5G8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.24■■□□□ 1.31
PCDHGA5Q9Y5G8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.24■■□□□ 1.31
PCDHGA5Q9Y5G8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDHGA5Q9Y5G8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA5Q9Y5G8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA5Q9Y5G8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA5Q9Y5G8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA5Q9Y5G8 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGA5Q9Y5G8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGA5Q9Y5G8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDHGA5Q9Y5G8 AC004448.1-201ENST00000458332 883 ntBASIC23.22■■□□□ 1.31
PCDHGA5Q9Y5G8 AC091305.1-201ENST00000479476 895 ntBASIC23.22■■□□□ 1.31
PCDHGA5Q9Y5G8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDHGA5Q9Y5G8 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDHGA5Q9Y5G8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDHGA5Q9Y5G8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
PCDHGA5Q9Y5G8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGA5Q9Y5G8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDHGA5Q9Y5G8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGA5Q9Y5G8 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGA5Q9Y5G8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.2■■□□□ 1.3
PCDHGA5Q9Y5G8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGA5Q9Y5G8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGA5Q9Y5G8 AP001330.3-201ENST00000520123 633 ntBASIC23.2■■□□□ 1.3
PCDHGA5Q9Y5G8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGA5Q9Y5G8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDHGA5Q9Y5G8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms