Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
PCDHGA6Q9Y5G7 KRT125P-201ENST00000546827 989 ntBASIC22.55■■□□□ 1.2
PCDHGA6Q9Y5G7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDHGA6Q9Y5G7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
PCDHGA6Q9Y5G7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDHGA6Q9Y5G7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGA6Q9Y5G7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGA6Q9Y5G7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PCDHGA6Q9Y5G7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGA6Q9Y5G7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
PCDHGA6Q9Y5G7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
PCDHGA6Q9Y5G7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
PCDHGA6Q9Y5G7 BX664725.1-201ENST00000438252 379 ntBASIC22.54■■□□□ 1.2
PCDHGA6Q9Y5G7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
PCDHGA6Q9Y5G7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGA6Q9Y5G7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PCDHGA6Q9Y5G7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.53■■□□□ 1.2
PCDHGA6Q9Y5G7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGA6Q9Y5G7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGA6Q9Y5G7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHGA6Q9Y5G7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHGA6Q9Y5G7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHGA6Q9Y5G7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGA6Q9Y5G7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGA6Q9Y5G7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGA6Q9Y5G7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGA6Q9Y5G7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.52■■□□□ 1.2
PCDHGA6Q9Y5G7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGA6Q9Y5G7 MIR4787-201ENST00000607364 84 ntBASIC22.51■■□□□ 1.19
PCDHGA6Q9Y5G7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGA6Q9Y5G7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGA6Q9Y5G7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGA6Q9Y5G7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PCDHGA6Q9Y5G7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHGA6Q9Y5G7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.5■■□□□ 1.19
PCDHGA6Q9Y5G7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGA6Q9Y5G7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGA6Q9Y5G7 ERN1-208ENST00000606895 2068 ntBASIC22.5■■□□□ 1.19
PCDHGA6Q9Y5G7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGA6Q9Y5G7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGA6Q9Y5G7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDHGA6Q9Y5G7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGA6Q9Y5G7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGA6Q9Y5G7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDHGA6Q9Y5G7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGA6Q9Y5G7 AC137630.3-201ENST00000607245 391 ntBASIC22.49■■□□□ 1.19
PCDHGA6Q9Y5G7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGA6Q9Y5G7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDHGA6Q9Y5G7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGA6Q9Y5G7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGA6Q9Y5G7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGA6Q9Y5G7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGA6Q9Y5G7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGA6Q9Y5G7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGA6Q9Y5G7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGA6Q9Y5G7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGA6Q9Y5G7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.47■■□□□ 1.19
PCDHGA6Q9Y5G7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHGA6Q9Y5G7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHGA6Q9Y5G7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGA6Q9Y5G7 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.47■■□□□ 1.19
PCDHGA6Q9Y5G7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
PCDHGA6Q9Y5G7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGA6Q9Y5G7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGA6Q9Y5G7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
PCDHGA6Q9Y5G7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
PCDHGA6Q9Y5G7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGA6Q9Y5G7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGA6Q9Y5G7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGA6Q9Y5G7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGA6Q9Y5G7 AC019069.1-201ENST00000610008 1333 ntBASIC22.46■■□□□ 1.19
PCDHGA6Q9Y5G7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGA6Q9Y5G7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDHGA6Q9Y5G7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
PCDHGA6Q9Y5G7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGA6Q9Y5G7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGA6Q9Y5G7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGA6Q9Y5G7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.45■■□□□ 1.18
PCDHGA6Q9Y5G7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHGA6Q9Y5G7 AC120024.1-201ENST00000562672 995 ntBASIC22.45■■□□□ 1.18
PCDHGA6Q9Y5G7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGA6Q9Y5G7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.45■■□□□ 1.18
PCDHGA6Q9Y5G7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGA6Q9Y5G7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGA6Q9Y5G7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGA6Q9Y5G7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGA6Q9Y5G7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
PCDHGA6Q9Y5G7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGA6Q9Y5G7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.44■■□□□ 1.18
PCDHGA6Q9Y5G7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDHGA6Q9Y5G7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDHGA6Q9Y5G7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGA6Q9Y5G7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.43■■□□□ 1.18
PCDHGA6Q9Y5G7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGA6Q9Y5G7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGA6Q9Y5G7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGA6Q9Y5G7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHGA6Q9Y5G7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDHGA6Q9Y5G7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGA6Q9Y5G7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms