Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COPS3Q9UNS2 MIR6089-201ENST00000616698 64 ntBASIC20.85■□□□□ 0.93
COPS3Q9UNS2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
COPS3Q9UNS2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COPS3Q9UNS2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.85■□□□□ 0.93
COPS3Q9UNS2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COPS3Q9UNS2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COPS3Q9UNS2 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COPS3Q9UNS2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
COPS3Q9UNS2 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COPS3Q9UNS2 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COPS3Q9UNS2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COPS3Q9UNS2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COPS3Q9UNS2 AC004812.2-201ENST00000611079 2094 ntBASIC20.84■□□□□ 0.93
COPS3Q9UNS2 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COPS3Q9UNS2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COPS3Q9UNS2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COPS3Q9UNS2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COPS3Q9UNS2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.83■□□□□ 0.93
COPS3Q9UNS2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.83■□□□□ 0.93
COPS3Q9UNS2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.83■□□□□ 0.93
COPS3Q9UNS2 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COPS3Q9UNS2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.83■□□□□ 0.92
COPS3Q9UNS2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COPS3Q9UNS2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.82■□□□□ 0.92
COPS3Q9UNS2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.82■□□□□ 0.92
COPS3Q9UNS2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.82■□□□□ 0.92
COPS3Q9UNS2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COPS3Q9UNS2 MIR7108-201ENST00000614319 87 ntBASIC20.82■□□□□ 0.92
COPS3Q9UNS2 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COPS3Q9UNS2 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COPS3Q9UNS2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COPS3Q9UNS2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COPS3Q9UNS2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.82■□□□□ 0.92
COPS3Q9UNS2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
COPS3Q9UNS2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COPS3Q9UNS2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
COPS3Q9UNS2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
COPS3Q9UNS2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.81■□□□□ 0.92
COPS3Q9UNS2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COPS3Q9UNS2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COPS3Q9UNS2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
COPS3Q9UNS2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.81■□□□□ 0.92
COPS3Q9UNS2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.81■□□□□ 0.92
COPS3Q9UNS2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.81■□□□□ 0.92
COPS3Q9UNS2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COPS3Q9UNS2 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.8■□□□□ 0.92
COPS3Q9UNS2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COPS3Q9UNS2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COPS3Q9UNS2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COPS3Q9UNS2 RP9P-202ENST00000450133 1212 ntBASIC20.8■□□□□ 0.92
COPS3Q9UNS2 ECEL1P2-201ENST00000461596 1295 ntBASIC20.8■□□□□ 0.92
COPS3Q9UNS2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.8■□□□□ 0.92
COPS3Q9UNS2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COPS3Q9UNS2 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COPS3Q9UNS2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.79■□□□□ 0.92
COPS3Q9UNS2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
COPS3Q9UNS2 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
COPS3Q9UNS2 AC093536.1-201ENST00000569153 554 ntBASIC20.79■□□□□ 0.92
COPS3Q9UNS2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.79■□□□□ 0.92
COPS3Q9UNS2 AC133561.1-201ENST00000568600 2415 ntBASIC20.79■□□□□ 0.92
COPS3Q9UNS2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COPS3Q9UNS2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COPS3Q9UNS2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.78■□□□□ 0.92
COPS3Q9UNS2 MIR639-201ENST00000384974 98 ntBASIC20.78■□□□□ 0.92
COPS3Q9UNS2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COPS3Q9UNS2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.78■□□□□ 0.92
COPS3Q9UNS2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
COPS3Q9UNS2 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COPS3Q9UNS2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COPS3Q9UNS2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.78■□□□□ 0.92
COPS3Q9UNS2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
COPS3Q9UNS2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
COPS3Q9UNS2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COPS3Q9UNS2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COPS3Q9UNS2 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
COPS3Q9UNS2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COPS3Q9UNS2 AC022413.1-201ENST00000624602 984 ntBASIC20.77■□□□□ 0.92
COPS3Q9UNS2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COPS3Q9UNS2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.77■□□□□ 0.92
COPS3Q9UNS2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COPS3Q9UNS2 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
COPS3Q9UNS2 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
COPS3Q9UNS2 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.76■□□□□ 0.91
COPS3Q9UNS2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COPS3Q9UNS2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COPS3Q9UNS2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.76■□□□□ 0.91
COPS3Q9UNS2 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COPS3Q9UNS2 ABCB10P4-201ENST00000566803 2184 ntBASIC20.76■□□□□ 0.91
COPS3Q9UNS2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
COPS3Q9UNS2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
COPS3Q9UNS2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COPS3Q9UNS2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COPS3Q9UNS2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
COPS3Q9UNS2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COPS3Q9UNS2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COPS3Q9UNS2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
COPS3Q9UNS2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.74■□□□□ 0.91
COPS3Q9UNS2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COPS3Q9UNS2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms