Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
CCNL1Q9UK58 SRD5A1P1-201ENST00000442297 786 ntBASIC30.4■■■□□ 2.46
CCNL1Q9UK58 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC30.4■■■□□ 2.46
CCNL1Q9UK58 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CCNL1Q9UK58 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC30.4■■■□□ 2.46
CCNL1Q9UK58 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CCNL1Q9UK58 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CCNL1Q9UK58 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CCNL1Q9UK58 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
CCNL1Q9UK58 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
CCNL1Q9UK58 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CCNL1Q9UK58 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC30.38■■■□□ 2.45
CCNL1Q9UK58 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
CCNL1Q9UK58 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
CCNL1Q9UK58 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
CCNL1Q9UK58 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC30.37■■■□□ 2.45
CCNL1Q9UK58 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
CCNL1Q9UK58 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
CCNL1Q9UK58 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC30.36■■■□□ 2.45
CCNL1Q9UK58 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC30.36■■■□□ 2.45
CCNL1Q9UK58 ANKRD20A6P-201ENST00000618763 204 ntBASIC30.36■■■□□ 2.45
CCNL1Q9UK58 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CCNL1Q9UK58 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CCNL1Q9UK58 AL136967.2-201ENST00000623968 743 ntBASIC30.35■■■□□ 2.45
CCNL1Q9UK58 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CCNL1Q9UK58 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
CCNL1Q9UK58 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.34■■■□□ 2.45
CCNL1Q9UK58 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC30.34■■■□□ 2.45
CCNL1Q9UK58 PARL-206ENST00000435888 1098 ntTSL 5 BASIC30.34■■■□□ 2.45
CCNL1Q9UK58 AF213884.3-201ENST00000563833 479 ntBASIC30.34■■■□□ 2.45
CCNL1Q9UK58 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC30.34■■■□□ 2.45
CCNL1Q9UK58 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CCNL1Q9UK58 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC30.33■■■□□ 2.45
CCNL1Q9UK58 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC30.33■■■□□ 2.45
CCNL1Q9UK58 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC30.33■■■□□ 2.45
CCNL1Q9UK58 FOXO3B-201ENST00000395675 1928 ntBASIC30.33■■■□□ 2.45
CCNL1Q9UK58 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC30.32■■■□□ 2.44
CCNL1Q9UK58 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CCNL1Q9UK58 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC30.32■■■□□ 2.44
CCNL1Q9UK58 GRAMD4P4-201ENST00000613563 1115 ntBASIC30.32■■■□□ 2.44
CCNL1Q9UK58 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC30.32■■■□□ 2.44
CCNL1Q9UK58 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CCNL1Q9UK58 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CCNL1Q9UK58 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CCNL1Q9UK58 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
CCNL1Q9UK58 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
CCNL1Q9UK58 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CCNL1Q9UK58 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CCNL1Q9UK58 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CCNL1Q9UK58 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CCNL1Q9UK58 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CCNL1Q9UK58 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CCNL1Q9UK58 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CCNL1Q9UK58 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CCNL1Q9UK58 MIR6821-201ENST00000617625 74 ntBASIC30.3■■■□□ 2.44
CCNL1Q9UK58 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC30.3■■■□□ 2.44
CCNL1Q9UK58 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.29■■■□□ 2.44
CCNL1Q9UK58 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC30.29■■■□□ 2.44
CCNL1Q9UK58 MIR939-201ENST00000401314 82 ntBASIC30.29■■■□□ 2.44
CCNL1Q9UK58 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
CCNL1Q9UK58 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
CCNL1Q9UK58 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
CCNL1Q9UK58 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
CCNL1Q9UK58 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC30.29■■■□□ 2.44
CCNL1Q9UK58 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC30.28■■■□□ 2.44
CCNL1Q9UK58 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC30.28■■■□□ 2.44
CCNL1Q9UK58 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CCNL1Q9UK58 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
CCNL1Q9UK58 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CCNL1Q9UK58 GATM-206ENST00000558336 1522 ntTSL 2 BASIC30.27■■■□□ 2.44
CCNL1Q9UK58 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CCNL1Q9UK58 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CCNL1Q9UK58 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
CCNL1Q9UK58 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC30.26■■■□□ 2.44
CCNL1Q9UK58 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
CCNL1Q9UK58 RBM38-205ENST00000440234 686 ntTSL 2 BASIC30.26■■■□□ 2.43
CCNL1Q9UK58 STOX2-205ENST00000513034 807 ntTSL 3 BASIC30.26■■■□□ 2.43
CCNL1Q9UK58 AP001330.3-201ENST00000520123 633 ntBASIC30.26■■■□□ 2.43
CCNL1Q9UK58 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CCNL1Q9UK58 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC30.25■■■□□ 2.43
CCNL1Q9UK58 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CCNL1Q9UK58 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CCNL1Q9UK58 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
CCNL1Q9UK58 AC139426.1-201ENST00000568218 2529 ntBASIC30.24■■■□□ 2.43
CCNL1Q9UK58 AC097381.1-201ENST00000429019 1296 ntBASIC30.24■■■□□ 2.43
CCNL1Q9UK58 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC30.24■■■□□ 2.43
CCNL1Q9UK58 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
CCNL1Q9UK58 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
CCNL1Q9UK58 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
CCNL1Q9UK58 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CCNL1Q9UK58 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CCNL1Q9UK58 AC090877.2-201ENST00000558441 1738 ntBASIC30.22■■■□□ 2.43
CCNL1Q9UK58 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.22■■■□□ 2.43
CCNL1Q9UK58 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
CCNL1Q9UK58 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC30.22■■■□□ 2.43
CCNL1Q9UK58 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CCNL1Q9UK58 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC30.22■■■□□ 2.43
CCNL1Q9UK58 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
CCNL1Q9UK58 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CCNL1Q9UK58 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms