Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
UBQLN2Q9UHD9 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN2Q9UHD9 ABCB10P4-201ENST00000566803 2184 ntBASIC19.68■□□□□ 0.74
UBQLN2Q9UHD9 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN2Q9UHD9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN2Q9UHD9 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN2Q9UHD9 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN2Q9UHD9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN2Q9UHD9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN2Q9UHD9 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
UBQLN2Q9UHD9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
UBQLN2Q9UHD9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN2Q9UHD9 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.67■□□□□ 0.74
UBQLN2Q9UHD9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN2Q9UHD9 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
UBQLN2Q9UHD9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN2Q9UHD9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN2Q9UHD9 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN2Q9UHD9 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN2Q9UHD9 AC233723.2-201ENST00000623798 2106 ntBASIC19.66■□□□□ 0.74
UBQLN2Q9UHD9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
UBQLN2Q9UHD9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN2Q9UHD9 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.66■□□□□ 0.74
UBQLN2Q9UHD9 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN2Q9UHD9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN2Q9UHD9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBQLN2Q9UHD9 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBQLN2Q9UHD9 AC137767.1-201ENST00000602918 1920 ntBASIC19.65■□□□□ 0.74
UBQLN2Q9UHD9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBQLN2Q9UHD9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.65■□□□□ 0.74
UBQLN2Q9UHD9 AL121603.2-201ENST00000557373 2117 ntBASIC19.65■□□□□ 0.74
UBQLN2Q9UHD9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.65■□□□□ 0.74
UBQLN2Q9UHD9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
UBQLN2Q9UHD9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBQLN2Q9UHD9 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
UBQLN2Q9UHD9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.65■□□□□ 0.74
UBQLN2Q9UHD9 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBQLN2Q9UHD9 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.64■□□□□ 0.74
UBQLN2Q9UHD9 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
UBQLN2Q9UHD9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.64■□□□□ 0.74
UBQLN2Q9UHD9 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.64■□□□□ 0.74
UBQLN2Q9UHD9 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
UBQLN2Q9UHD9 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
UBQLN2Q9UHD9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.64■□□□□ 0.73
UBQLN2Q9UHD9 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN2Q9UHD9 AC141586.4-201ENST00000624558 1573 ntBASIC19.64■□□□□ 0.73
UBQLN2Q9UHD9 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN2Q9UHD9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN2Q9UHD9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.64■□□□□ 0.73
UBQLN2Q9UHD9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN2Q9UHD9 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
UBQLN2Q9UHD9 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
UBQLN2Q9UHD9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
UBQLN2Q9UHD9 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN2Q9UHD9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN2Q9UHD9 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
UBQLN2Q9UHD9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN2Q9UHD9 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN2Q9UHD9 AC108673.1-201ENST00000510422 1159 ntBASIC19.63■□□□□ 0.73
UBQLN2Q9UHD9 MIR6090-201ENST00000622481 60 ntBASIC19.63■□□□□ 0.73
UBQLN2Q9UHD9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN2Q9UHD9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN2Q9UHD9 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN2Q9UHD9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.62■□□□□ 0.73
UBQLN2Q9UHD9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
UBQLN2Q9UHD9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.62■□□□□ 0.73
UBQLN2Q9UHD9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.62■□□□□ 0.73
UBQLN2Q9UHD9 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN2Q9UHD9 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.62■□□□□ 0.73
UBQLN2Q9UHD9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
UBQLN2Q9UHD9 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN2Q9UHD9 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN2Q9UHD9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN2Q9UHD9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN2Q9UHD9 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN2Q9UHD9 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN2Q9UHD9 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.61■□□□□ 0.73
UBQLN2Q9UHD9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.61■□□□□ 0.73
UBQLN2Q9UHD9 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.61■□□□□ 0.73
UBQLN2Q9UHD9 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN2Q9UHD9 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.61■□□□□ 0.73
UBQLN2Q9UHD9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.6■□□□□ 0.73
UBQLN2Q9UHD9 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.6■□□□□ 0.73
UBQLN2Q9UHD9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.6■□□□□ 0.73
UBQLN2Q9UHD9 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.6■□□□□ 0.73
UBQLN2Q9UHD9 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN2Q9UHD9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN2Q9UHD9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN2Q9UHD9 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN2Q9UHD9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN2Q9UHD9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN2Q9UHD9 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN2Q9UHD9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.59■□□□□ 0.73
UBQLN2Q9UHD9 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN2Q9UHD9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN2Q9UHD9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN2Q9UHD9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
UBQLN2Q9UHD9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBQLN2Q9UHD9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
UBQLN2Q9UHD9 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms