Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LIN7CQ9NUP9 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LIN7CQ9NUP9 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LIN7CQ9NUP9 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.38■□□□□ 0.69
LIN7CQ9NUP9 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.38■□□□□ 0.69
LIN7CQ9NUP9 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LIN7CQ9NUP9 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LIN7CQ9NUP9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LIN7CQ9NUP9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
LIN7CQ9NUP9 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.37■□□□□ 0.69
LIN7CQ9NUP9 AC093536.1-201ENST00000569153 554 ntBASIC19.37■□□□□ 0.69
LIN7CQ9NUP9 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
LIN7CQ9NUP9 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LIN7CQ9NUP9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.36■□□□□ 0.69
LIN7CQ9NUP9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LIN7CQ9NUP9 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.36■□□□□ 0.69
LIN7CQ9NUP9 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LIN7CQ9NUP9 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
LIN7CQ9NUP9 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LIN7CQ9NUP9 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LIN7CQ9NUP9 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LIN7CQ9NUP9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LIN7CQ9NUP9 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LIN7CQ9NUP9 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
LIN7CQ9NUP9 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LIN7CQ9NUP9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.35■□□□□ 0.69
LIN7CQ9NUP9 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LIN7CQ9NUP9 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LIN7CQ9NUP9 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.35■□□□□ 0.69
LIN7CQ9NUP9 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.35■□□□□ 0.69
LIN7CQ9NUP9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LIN7CQ9NUP9 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LIN7CQ9NUP9 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LIN7CQ9NUP9 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
LIN7CQ9NUP9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LIN7CQ9NUP9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LIN7CQ9NUP9 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
LIN7CQ9NUP9 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LIN7CQ9NUP9 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LIN7CQ9NUP9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LIN7CQ9NUP9 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.34■□□□□ 0.69
LIN7CQ9NUP9 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LIN7CQ9NUP9 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LIN7CQ9NUP9 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LIN7CQ9NUP9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LIN7CQ9NUP9 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LIN7CQ9NUP9 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
LIN7CQ9NUP9 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.33■□□□□ 0.69
LIN7CQ9NUP9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.33■□□□□ 0.69
LIN7CQ9NUP9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.33■□□□□ 0.69
LIN7CQ9NUP9 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LIN7CQ9NUP9 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.33■□□□□ 0.68
LIN7CQ9NUP9 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.33■□□□□ 0.68
LIN7CQ9NUP9 AC026202.3-201ENST00000600805 1127 ntBASIC19.33■□□□□ 0.68
LIN7CQ9NUP9 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LIN7CQ9NUP9 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LIN7CQ9NUP9 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LIN7CQ9NUP9 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
LIN7CQ9NUP9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LIN7CQ9NUP9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.32■□□□□ 0.68
LIN7CQ9NUP9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LIN7CQ9NUP9 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LIN7CQ9NUP9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LIN7CQ9NUP9 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.32■□□□□ 0.68
LIN7CQ9NUP9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
LIN7CQ9NUP9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LIN7CQ9NUP9 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LIN7CQ9NUP9 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LIN7CQ9NUP9 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.31■□□□□ 0.68
LIN7CQ9NUP9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LIN7CQ9NUP9 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.31■□□□□ 0.68
LIN7CQ9NUP9 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LIN7CQ9NUP9 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LIN7CQ9NUP9 AC133552.2-201ENST00000619106 1032 ntBASIC19.31■□□□□ 0.68
LIN7CQ9NUP9 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LIN7CQ9NUP9 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LIN7CQ9NUP9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LIN7CQ9NUP9 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LIN7CQ9NUP9 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LIN7CQ9NUP9 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.3■□□□□ 0.68
LIN7CQ9NUP9 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LIN7CQ9NUP9 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LIN7CQ9NUP9 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LIN7CQ9NUP9 NTF6A-201ENST00000591175 560 ntBASIC19.3■□□□□ 0.68
LIN7CQ9NUP9 RAP2CP1-202ENST00000605179 643 ntBASIC19.3■□□□□ 0.68
LIN7CQ9NUP9 AC009831.1-201ENST00000580420 1582 ntBASIC19.3■□□□□ 0.68
LIN7CQ9NUP9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.3■□□□□ 0.68
LIN7CQ9NUP9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LIN7CQ9NUP9 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LIN7CQ9NUP9 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LIN7CQ9NUP9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LIN7CQ9NUP9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LIN7CQ9NUP9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LIN7CQ9NUP9 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LIN7CQ9NUP9 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LIN7CQ9NUP9 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LIN7CQ9NUP9 MIR6089-201ENST00000616698 64 ntBASIC19.29■□□□□ 0.68
LIN7CQ9NUP9 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LIN7CQ9NUP9 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.29■□□□□ 0.68
LIN7CQ9NUP9 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms