Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CPNE5Q9HCH3 AC096631.2-201ENST00000436136 790 ntBASIC22.6■■□□□ 1.21
CPNE5Q9HCH3 AC092666.2-201ENST00000613287 246 ntBASIC22.6■■□□□ 1.21
CPNE5Q9HCH3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
CPNE5Q9HCH3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
CPNE5Q9HCH3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CPNE5Q9HCH3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CPNE5Q9HCH3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CPNE5Q9HCH3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.59■■□□□ 1.21
CPNE5Q9HCH3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
CPNE5Q9HCH3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CPNE5Q9HCH3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CPNE5Q9HCH3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CPNE5Q9HCH3 AC120024.1-201ENST00000562672 995 ntBASIC22.58■■□□□ 1.21
CPNE5Q9HCH3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
CPNE5Q9HCH3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CPNE5Q9HCH3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPNE5Q9HCH3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
CPNE5Q9HCH3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CPNE5Q9HCH3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPNE5Q9HCH3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPNE5Q9HCH3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.57■■□□□ 1.2
CPNE5Q9HCH3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.57■■□□□ 1.2
CPNE5Q9HCH3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.57■■□□□ 1.2
CPNE5Q9HCH3 AL117332.1-201ENST00000622628 974 ntBASIC22.57■■□□□ 1.2
CPNE5Q9HCH3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.57■■□□□ 1.2
CPNE5Q9HCH3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
CPNE5Q9HCH3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPNE5Q9HCH3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CPNE5Q9HCH3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CPNE5Q9HCH3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CPNE5Q9HCH3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.56■■□□□ 1.2
CPNE5Q9HCH3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.56■■□□□ 1.2
CPNE5Q9HCH3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CPNE5Q9HCH3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CPNE5Q9HCH3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
CPNE5Q9HCH3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
CPNE5Q9HCH3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPNE5Q9HCH3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.55■■□□□ 1.2
CPNE5Q9HCH3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.55■■□□□ 1.2
CPNE5Q9HCH3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.55■■□□□ 1.2
CPNE5Q9HCH3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CPNE5Q9HCH3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.54■■□□□ 1.2
CPNE5Q9HCH3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CPNE5Q9HCH3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.54■■□□□ 1.2
CPNE5Q9HCH3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.54■■□□□ 1.2
CPNE5Q9HCH3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CPNE5Q9HCH3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CPNE5Q9HCH3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CPNE5Q9HCH3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CPNE5Q9HCH3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CPNE5Q9HCH3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.53■■□□□ 1.2
CPNE5Q9HCH3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CPNE5Q9HCH3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.53■■□□□ 1.2
CPNE5Q9HCH3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CPNE5Q9HCH3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
CPNE5Q9HCH3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CPNE5Q9HCH3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
CPNE5Q9HCH3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.52■■□□□ 1.2
CPNE5Q9HCH3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CPNE5Q9HCH3 AC010997.5-201ENST00000609182 354 ntBASIC22.52■■□□□ 1.2
CPNE5Q9HCH3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CPNE5Q9HCH3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.19
CPNE5Q9HCH3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.51■■□□□ 1.19
CPNE5Q9HCH3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.51■■□□□ 1.19
CPNE5Q9HCH3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
CPNE5Q9HCH3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CPNE5Q9HCH3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CPNE5Q9HCH3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CPNE5Q9HCH3 KRT18P10-201ENST00000388836 1287 ntBASIC22.51■■□□□ 1.19
CPNE5Q9HCH3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.51■■□□□ 1.19
CPNE5Q9HCH3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CPNE5Q9HCH3 MIR3621-201ENST00000580529 85 ntBASIC22.51■■□□□ 1.19
CPNE5Q9HCH3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CPNE5Q9HCH3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.51■■□□□ 1.19
CPNE5Q9HCH3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CPNE5Q9HCH3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CPNE5Q9HCH3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.51■■□□□ 1.19
CPNE5Q9HCH3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CPNE5Q9HCH3 AC091060.1-201ENST00000623524 1766 ntBASIC22.5■■□□□ 1.19
CPNE5Q9HCH3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CPNE5Q9HCH3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
CPNE5Q9HCH3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CPNE5Q9HCH3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.5■■□□□ 1.19
CPNE5Q9HCH3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CPNE5Q9HCH3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.5■■□□□ 1.19
CPNE5Q9HCH3 MIR4466-201ENST00000606121 54 ntBASIC22.5■■□□□ 1.19
CPNE5Q9HCH3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CPNE5Q9HCH3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CPNE5Q9HCH3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CPNE5Q9HCH3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.5■■□□□ 1.19
CPNE5Q9HCH3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CPNE5Q9HCH3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
CPNE5Q9HCH3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
CPNE5Q9HCH3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.49■■□□□ 1.19
CPNE5Q9HCH3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CPNE5Q9HCH3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CPNE5Q9HCH3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CPNE5Q9HCH3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CPNE5Q9HCH3 RARRES2P6-201ENST00000567333 442 ntBASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms