Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
ZFYVE28Q9HCC9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
ZFYVE28Q9HCC9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC27.24■■□□□ 1.95
ZFYVE28Q9HCC9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC27.24■■□□□ 1.95
ZFYVE28Q9HCC9 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
ZFYVE28Q9HCC9 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ZFYVE28Q9HCC9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
ZFYVE28Q9HCC9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ZFYVE28Q9HCC9 ANKRD20A6P-201ENST00000618763 204 ntBASIC27.23■■□□□ 1.95
ZFYVE28Q9HCC9 AL136967.2-201ENST00000623968 743 ntBASIC27.23■■□□□ 1.95
ZFYVE28Q9HCC9 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ZFYVE28Q9HCC9 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC27.23■■□□□ 1.95
ZFYVE28Q9HCC9 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC27.22■■□□□ 1.95
ZFYVE28Q9HCC9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
ZFYVE28Q9HCC9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ZFYVE28Q9HCC9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC27.22■■□□□ 1.95
ZFYVE28Q9HCC9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ZFYVE28Q9HCC9 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC27.22■■□□□ 1.95
ZFYVE28Q9HCC9 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
ZFYVE28Q9HCC9 GRAMD4P4-201ENST00000613563 1115 ntBASIC27.21■■□□□ 1.95
ZFYVE28Q9HCC9 MIR6821-201ENST00000617625 74 ntBASIC27.21■■□□□ 1.95
ZFYVE28Q9HCC9 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
ZFYVE28Q9HCC9 AP004609.3-201ENST00000610705 1884 ntBASIC27.21■■□□□ 1.95
ZFYVE28Q9HCC9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC27.2■■□□□ 1.95
ZFYVE28Q9HCC9 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.95
ZFYVE28Q9HCC9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC27.2■■□□□ 1.94
ZFYVE28Q9HCC9 AF213884.3-201ENST00000563833 479 ntBASIC27.2■■□□□ 1.94
ZFYVE28Q9HCC9 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.2■■□□□ 1.94
ZFYVE28Q9HCC9 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.2■■□□□ 1.94
ZFYVE28Q9HCC9 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
ZFYVE28Q9HCC9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
ZFYVE28Q9HCC9 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
ZFYVE28Q9HCC9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC27.19■■□□□ 1.94
ZFYVE28Q9HCC9 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
ZFYVE28Q9HCC9 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
ZFYVE28Q9HCC9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC27.18■■□□□ 1.94
ZFYVE28Q9HCC9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
ZFYVE28Q9HCC9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC27.18■■□□□ 1.94
ZFYVE28Q9HCC9 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
ZFYVE28Q9HCC9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC27.16■■□□□ 1.94
ZFYVE28Q9HCC9 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
ZFYVE28Q9HCC9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC27.16■■□□□ 1.94
ZFYVE28Q9HCC9 MIR939-201ENST00000401314 82 ntBASIC27.16■■□□□ 1.94
ZFYVE28Q9HCC9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC27.16■■□□□ 1.94
ZFYVE28Q9HCC9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC27.16■■□□□ 1.94
ZFYVE28Q9HCC9 FOXO3B-201ENST00000395675 1928 ntBASIC27.16■■□□□ 1.94
ZFYVE28Q9HCC9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
ZFYVE28Q9HCC9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC27.15■■□□□ 1.94
ZFYVE28Q9HCC9 AC097381.1-201ENST00000429019 1296 ntBASIC27.15■■□□□ 1.94
ZFYVE28Q9HCC9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC27.15■■□□□ 1.94
ZFYVE28Q9HCC9 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
ZFYVE28Q9HCC9 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
ZFYVE28Q9HCC9 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
ZFYVE28Q9HCC9 DUX4L19-201ENST00000557448 1267 ntBASIC27.14■■□□□ 1.94
ZFYVE28Q9HCC9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
ZFYVE28Q9HCC9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.93
ZFYVE28Q9HCC9 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.93
ZFYVE28Q9HCC9 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
ZFYVE28Q9HCC9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
ZFYVE28Q9HCC9 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC27.13■■□□□ 1.93
ZFYVE28Q9HCC9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
ZFYVE28Q9HCC9 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC27.13■■□□□ 1.93
ZFYVE28Q9HCC9 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
ZFYVE28Q9HCC9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC27.12■■□□□ 1.93
ZFYVE28Q9HCC9 AC004448.1-201ENST00000458332 883 ntBASIC27.12■■□□□ 1.93
ZFYVE28Q9HCC9 AP001330.3-201ENST00000520123 633 ntBASIC27.12■■□□□ 1.93
ZFYVE28Q9HCC9 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
ZFYVE28Q9HCC9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC27.12■■□□□ 1.93
ZFYVE28Q9HCC9 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
ZFYVE28Q9HCC9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
ZFYVE28Q9HCC9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC27.11■■□□□ 1.93
ZFYVE28Q9HCC9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
ZFYVE28Q9HCC9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
ZFYVE28Q9HCC9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
ZFYVE28Q9HCC9 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
ZFYVE28Q9HCC9 AC091305.1-201ENST00000479476 895 ntBASIC27.11■■□□□ 1.93
ZFYVE28Q9HCC9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC27.11■■□□□ 1.93
ZFYVE28Q9HCC9 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
ZFYVE28Q9HCC9 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
ZFYVE28Q9HCC9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
ZFYVE28Q9HCC9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
ZFYVE28Q9HCC9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
ZFYVE28Q9HCC9 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
ZFYVE28Q9HCC9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
ZFYVE28Q9HCC9 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
ZFYVE28Q9HCC9 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
ZFYVE28Q9HCC9 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
ZFYVE28Q9HCC9 AC090877.2-201ENST00000558441 1738 ntBASIC27.08■■□□□ 1.93
ZFYVE28Q9HCC9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
ZFYVE28Q9HCC9 LBH-205ENST00000407930 756 ntTSL 2 BASIC27.08■■□□□ 1.93
ZFYVE28Q9HCC9 AL162430.1-201ENST00000480705 870 ntBASIC27.08■■□□□ 1.93
ZFYVE28Q9HCC9 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC27.08■■□□□ 1.93
ZFYVE28Q9HCC9 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC27.08■■□□□ 1.93
ZFYVE28Q9HCC9 AC087623.3-201ENST00000607047 1098 ntBASIC27.08■■□□□ 1.93
ZFYVE28Q9HCC9 SF1-220ENST00000626028 704 ntTSL 2 BASIC27.08■■□□□ 1.93
ZFYVE28Q9HCC9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC27.08■■□□□ 1.93
ZFYVE28Q9HCC9 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
ZFYVE28Q9HCC9 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC27.08■■□□□ 1.92
ZFYVE28Q9HCC9 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC27.08■■□□□ 1.92
ZFYVE28Q9HCC9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC27.07■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms