Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SND1-IT1Q9HBX3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SND1-IT1Q9HBX3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SND1-IT1Q9HBX3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC15.6■□□□□ 0.09
SND1-IT1Q9HBX3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SND1-IT1Q9HBX3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SND1-IT1Q9HBX3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC15.6■□□□□ 0.09
SND1-IT1Q9HBX3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SND1-IT1Q9HBX3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
SND1-IT1Q9HBX3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
SND1-IT1Q9HBX3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SND1-IT1Q9HBX3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC15.59■□□□□ 0.09
SND1-IT1Q9HBX3 LINC01971-201ENST00000617888 1048 ntBASIC15.59■□□□□ 0.09
SND1-IT1Q9HBX3 AC148477.6-201ENST00000623746 465 ntBASIC15.59■□□□□ 0.09
SND1-IT1Q9HBX3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
SND1-IT1Q9HBX3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SND1-IT1Q9HBX3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC15.59■□□□□ 0.09
SND1-IT1Q9HBX3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
SND1-IT1Q9HBX3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SND1-IT1Q9HBX3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC15.59■□□□□ 0.09
SND1-IT1Q9HBX3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SND1-IT1Q9HBX3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SND1-IT1Q9HBX3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SND1-IT1Q9HBX3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SND1-IT1Q9HBX3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SND1-IT1Q9HBX3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SND1-IT1Q9HBX3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SND1-IT1Q9HBX3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SND1-IT1Q9HBX3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SND1-IT1Q9HBX3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SND1-IT1Q9HBX3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SND1-IT1Q9HBX3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC15.58■□□□□ 0.08
SND1-IT1Q9HBX3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SND1-IT1Q9HBX3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SND1-IT1Q9HBX3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SND1-IT1Q9HBX3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
SND1-IT1Q9HBX3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SND1-IT1Q9HBX3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SND1-IT1Q9HBX3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SND1-IT1Q9HBX3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SND1-IT1Q9HBX3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SND1-IT1Q9HBX3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SND1-IT1Q9HBX3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SND1-IT1Q9HBX3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SND1-IT1Q9HBX3 DUX4L13-201ENST00000554103 1267 ntBASIC15.57■□□□□ 0.08
SND1-IT1Q9HBX3 DUX4L15-201ENST00000611059 1267 ntBASIC15.57■□□□□ 0.08
SND1-IT1Q9HBX3 DUX4L23-201ENST00000615195 1269 ntBASIC15.57■□□□□ 0.08
SND1-IT1Q9HBX3 DUX4L24-201ENST00000617576 1269 ntBASIC15.57■□□□□ 0.08
SND1-IT1Q9HBX3 DUX4L22-201ENST00000618238 1269 ntBASIC15.57■□□□□ 0.08
SND1-IT1Q9HBX3 DUX4L20-201ENST00000619712 1269 ntBASIC15.57■□□□□ 0.08
SND1-IT1Q9HBX3 DUX4L21-201ENST00000622058 1269 ntBASIC15.57■□□□□ 0.08
SND1-IT1Q9HBX3 DUX4L10-201ENST00000622460 1267 ntBASIC15.57■□□□□ 0.08
SND1-IT1Q9HBX3 DUX4L25-201ENST00000624915 1269 ntBASIC15.57■□□□□ 0.08
SND1-IT1Q9HBX3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SND1-IT1Q9HBX3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SND1-IT1Q9HBX3 CLDN5-201ENST00000403084 2357 ntBASIC15.57■□□□□ 0.08
SND1-IT1Q9HBX3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SND1-IT1Q9HBX3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SND1-IT1Q9HBX3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SND1-IT1Q9HBX3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC15.57■□□□□ 0.08
SND1-IT1Q9HBX3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
SND1-IT1Q9HBX3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SND1-IT1Q9HBX3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SND1-IT1Q9HBX3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SND1-IT1Q9HBX3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SND1-IT1Q9HBX3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC15.56■□□□□ 0.08
SND1-IT1Q9HBX3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SND1-IT1Q9HBX3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SND1-IT1Q9HBX3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SND1-IT1Q9HBX3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SND1-IT1Q9HBX3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SND1-IT1Q9HBX3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SND1-IT1Q9HBX3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SND1-IT1Q9HBX3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC15.56■□□□□ 0.08
SND1-IT1Q9HBX3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SND1-IT1Q9HBX3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SND1-IT1Q9HBX3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SND1-IT1Q9HBX3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SND1-IT1Q9HBX3 SLC6A10P-202ENST00000431994 2058 ntBASIC15.55■□□□□ 0.08
SND1-IT1Q9HBX3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SND1-IT1Q9HBX3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC15.55■□□□□ 0.08
SND1-IT1Q9HBX3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC15.55■□□□□ 0.08
SND1-IT1Q9HBX3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SND1-IT1Q9HBX3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SND1-IT1Q9HBX3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SND1-IT1Q9HBX3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SND1-IT1Q9HBX3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SND1-IT1Q9HBX3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SND1-IT1Q9HBX3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC15.55■□□□□ 0.08
SND1-IT1Q9HBX3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SND1-IT1Q9HBX3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SND1-IT1Q9HBX3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SND1-IT1Q9HBX3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC15.54■□□□□ 0.08
SND1-IT1Q9HBX3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SND1-IT1Q9HBX3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC15.54■□□□□ 0.08
SND1-IT1Q9HBX3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SND1-IT1Q9HBX3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SND1-IT1Q9HBX3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SND1-IT1Q9HBX3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SND1-IT1Q9HBX3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms