Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LRTM1Q9HBL6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LRTM1Q9HBL6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
LRTM1Q9HBL6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
LRTM1Q9HBL6 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
LRTM1Q9HBL6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LRTM1Q9HBL6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LRTM1Q9HBL6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.19
LRTM1Q9HBL6 FOXO3B-201ENST00000395675 1928 ntBASIC22.51■■□□□ 1.19
LRTM1Q9HBL6 AC009831.1-201ENST00000580420 1582 ntBASIC22.51■■□□□ 1.19
LRTM1Q9HBL6 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.51■■□□□ 1.19
LRTM1Q9HBL6 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.51■■□□□ 1.19
LRTM1Q9HBL6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LRTM1Q9HBL6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LRTM1Q9HBL6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LRTM1Q9HBL6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.51■■□□□ 1.19
LRTM1Q9HBL6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LRTM1Q9HBL6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LRTM1Q9HBL6 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.51■■□□□ 1.19
LRTM1Q9HBL6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LRTM1Q9HBL6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
LRTM1Q9HBL6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.5■■□□□ 1.19
LRTM1Q9HBL6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.5■■□□□ 1.19
LRTM1Q9HBL6 AC133552.2-201ENST00000619106 1032 ntBASIC22.5■■□□□ 1.19
LRTM1Q9HBL6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
LRTM1Q9HBL6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
LRTM1Q9HBL6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LRTM1Q9HBL6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.49■■□□□ 1.19
LRTM1Q9HBL6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.49■■□□□ 1.19
LRTM1Q9HBL6 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LRTM1Q9HBL6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.49■■□□□ 1.19
LRTM1Q9HBL6 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.49■■□□□ 1.19
LRTM1Q9HBL6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.49■■□□□ 1.19
LRTM1Q9HBL6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
LRTM1Q9HBL6 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LRTM1Q9HBL6 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
LRTM1Q9HBL6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LRTM1Q9HBL6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LRTM1Q9HBL6 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LRTM1Q9HBL6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
LRTM1Q9HBL6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
LRTM1Q9HBL6 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.48■■□□□ 1.19
LRTM1Q9HBL6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
LRTM1Q9HBL6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LRTM1Q9HBL6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
LRTM1Q9HBL6 RNF126P1-201ENST00000567452 1320 ntBASIC22.48■■□□□ 1.19
LRTM1Q9HBL6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.48■■□□□ 1.19
LRTM1Q9HBL6 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
LRTM1Q9HBL6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
LRTM1Q9HBL6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.47■■□□□ 1.19
LRTM1Q9HBL6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.47■■□□□ 1.19
LRTM1Q9HBL6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
LRTM1Q9HBL6 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
LRTM1Q9HBL6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
LRTM1Q9HBL6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
LRTM1Q9HBL6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
LRTM1Q9HBL6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.46■■□□□ 1.19
LRTM1Q9HBL6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.46■■□□□ 1.19
LRTM1Q9HBL6 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
LRTM1Q9HBL6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
LRTM1Q9HBL6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.45■■□□□ 1.19
LRTM1Q9HBL6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
LRTM1Q9HBL6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.45■■□□□ 1.18
LRTM1Q9HBL6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
LRTM1Q9HBL6 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
LRTM1Q9HBL6 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
LRTM1Q9HBL6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.45■■□□□ 1.18
LRTM1Q9HBL6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
LRTM1Q9HBL6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LRTM1Q9HBL6 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LRTM1Q9HBL6 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.44■■□□□ 1.18
LRTM1Q9HBL6 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
LRTM1Q9HBL6 HLA-L-211ENST00000482052 1765 ntBASIC22.44■■□□□ 1.18
LRTM1Q9HBL6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
LRTM1Q9HBL6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
LRTM1Q9HBL6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
LRTM1Q9HBL6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
LRTM1Q9HBL6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
LRTM1Q9HBL6 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LRTM1Q9HBL6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
LRTM1Q9HBL6 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LRTM1Q9HBL6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
LRTM1Q9HBL6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
LRTM1Q9HBL6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LRTM1Q9HBL6 AC004812.2-201ENST00000611079 2094 ntBASIC22.42■■□□□ 1.18
LRTM1Q9HBL6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
LRTM1Q9HBL6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LRTM1Q9HBL6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LRTM1Q9HBL6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.42■■□□□ 1.18
LRTM1Q9HBL6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
LRTM1Q9HBL6 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
LRTM1Q9HBL6 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
LRTM1Q9HBL6 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
LRTM1Q9HBL6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
LRTM1Q9HBL6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
LRTM1Q9HBL6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
LRTM1Q9HBL6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
LRTM1Q9HBL6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
LRTM1Q9HBL6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
LRTM1Q9HBL6 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms