Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
DDX47Q9H0S4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
DDX47Q9H0S4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
DDX47Q9H0S4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.45■■□□□ 1.5
DDX47Q9H0S4 AC025884.2-201ENST00000553429 711 ntBASIC24.45■■□□□ 1.5
DDX47Q9H0S4 MIR6089-201ENST00000616698 64 ntBASIC24.45■■□□□ 1.5
DDX47Q9H0S4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
DDX47Q9H0S4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
DDX47Q9H0S4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
DDX47Q9H0S4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.44■■□□□ 1.5
DDX47Q9H0S4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24.44■■□□□ 1.5
DDX47Q9H0S4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
DDX47Q9H0S4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
DDX47Q9H0S4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
DDX47Q9H0S4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.44■■□□□ 1.5
DDX47Q9H0S4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.43■■□□□ 1.5
DDX47Q9H0S4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.43■■□□□ 1.5
DDX47Q9H0S4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
DDX47Q9H0S4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.43■■□□□ 1.5
DDX47Q9H0S4 DUSP8P5-201ENST00000422884 1815 ntBASIC24.42■■□□□ 1.5
DDX47Q9H0S4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
DDX47Q9H0S4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
DDX47Q9H0S4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
DDX47Q9H0S4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
DDX47Q9H0S4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
DDX47Q9H0S4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
DDX47Q9H0S4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
DDX47Q9H0S4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
DDX47Q9H0S4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
DDX47Q9H0S4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
DDX47Q9H0S4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
DDX47Q9H0S4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.41■■□□□ 1.5
DDX47Q9H0S4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
DDX47Q9H0S4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
DDX47Q9H0S4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
DDX47Q9H0S4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
DDX47Q9H0S4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.4■■□□□ 1.5
DDX47Q9H0S4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.4■■□□□ 1.5
DDX47Q9H0S4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
DDX47Q9H0S4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.39■■□□□ 1.49
DDX47Q9H0S4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.39■■□□□ 1.49
DDX47Q9H0S4 AC016575.1-201ENST00000607026 382 ntBASIC24.39■■□□□ 1.49
DDX47Q9H0S4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
DDX47Q9H0S4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
DDX47Q9H0S4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
DDX47Q9H0S4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
DDX47Q9H0S4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
DDX47Q9H0S4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC24.38■■□□□ 1.49
DDX47Q9H0S4 MIR3960-201ENST00000583311 91 ntBASIC24.38■■□□□ 1.49
DDX47Q9H0S4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
DDX47Q9H0S4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.38■■□□□ 1.49
DDX47Q9H0S4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
DDX47Q9H0S4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.37■■□□□ 1.49
DDX47Q9H0S4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.37■■□□□ 1.49
DDX47Q9H0S4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
DDX47Q9H0S4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
DDX47Q9H0S4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
DDX47Q9H0S4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
DDX47Q9H0S4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
DDX47Q9H0S4 AC060814.1-201ENST00000554326 538 ntBASIC24.36■■□□□ 1.49
DDX47Q9H0S4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.36■■□□□ 1.49
DDX47Q9H0S4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
DDX47Q9H0S4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
DDX47Q9H0S4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
DDX47Q9H0S4 ABHD17AP4-201ENST00000411545 909 ntBASIC24.35■■□□□ 1.49
DDX47Q9H0S4 HLA-L-211ENST00000482052 1765 ntBASIC24.34■■□□□ 1.49
DDX47Q9H0S4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
DDX47Q9H0S4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
DDX47Q9H0S4 SMPD5-203ENST00000639008 1464 ntBASIC24.33■■□□□ 1.49
DDX47Q9H0S4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
DDX47Q9H0S4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.33■■□□□ 1.49
DDX47Q9H0S4 C9orf163-202ENST00000624034 2573 ntBASIC24.33■■□□□ 1.48
DDX47Q9H0S4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
DDX47Q9H0S4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.33■■□□□ 1.48
DDX47Q9H0S4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.33■■□□□ 1.48
DDX47Q9H0S4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
DDX47Q9H0S4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
DDX47Q9H0S4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
DDX47Q9H0S4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
DDX47Q9H0S4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
DDX47Q9H0S4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
DDX47Q9H0S4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.32■■□□□ 1.48
DDX47Q9H0S4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
DDX47Q9H0S4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.32■■□□□ 1.48
DDX47Q9H0S4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
DDX47Q9H0S4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
DDX47Q9H0S4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
DDX47Q9H0S4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
DDX47Q9H0S4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
DDX47Q9H0S4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.31■■□□□ 1.48
DDX47Q9H0S4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
DDX47Q9H0S4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
DDX47Q9H0S4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.31■■□□□ 1.48
DDX47Q9H0S4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
DDX47Q9H0S4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
DDX47Q9H0S4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
DDX47Q9H0S4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
DDX47Q9H0S4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
DDX47Q9H0S4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
DDX47Q9H0S4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms