Protein–RNA interactions for Protein: Q9BWW7

SCRT1, Transcriptional repressor scratch 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1Q9BWW7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SCRT1Q9BWW7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCRT1Q9BWW7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.76■□□□□ 0.59
SCRT1Q9BWW7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.76■□□□□ 0.59
SCRT1Q9BWW7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.76■□□□□ 0.59
SCRT1Q9BWW7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SCRT1Q9BWW7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.76■□□□□ 0.59
SCRT1Q9BWW7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCRT1Q9BWW7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SCRT1Q9BWW7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.76■□□□□ 0.59
SCRT1Q9BWW7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SCRT1Q9BWW7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCRT1Q9BWW7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SCRT1Q9BWW7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
SCRT1Q9BWW7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.75■□□□□ 0.59
SCRT1Q9BWW7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.75■□□□□ 0.59
SCRT1Q9BWW7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCRT1Q9BWW7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SCRT1Q9BWW7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SCRT1Q9BWW7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.75■□□□□ 0.59
SCRT1Q9BWW7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SCRT1Q9BWW7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCRT1Q9BWW7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC18.74■□□□□ 0.59
SCRT1Q9BWW7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SCRT1Q9BWW7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.74■□□□□ 0.59
SCRT1Q9BWW7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCRT1Q9BWW7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCRT1Q9BWW7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCRT1Q9BWW7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCRT1Q9BWW7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.74■□□□□ 0.59
SCRT1Q9BWW7 MIR7108-201ENST00000614319 87 ntBASIC18.74■□□□□ 0.59
SCRT1Q9BWW7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCRT1Q9BWW7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SCRT1Q9BWW7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCRT1Q9BWW7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.73■□□□□ 0.59
SCRT1Q9BWW7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCRT1Q9BWW7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCRT1Q9BWW7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCRT1Q9BWW7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCRT1Q9BWW7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.73■□□□□ 0.59
SCRT1Q9BWW7 DUX4L13-201ENST00000554103 1267 ntBASIC18.73■□□□□ 0.59
SCRT1Q9BWW7 DUX4L15-201ENST00000611059 1267 ntBASIC18.73■□□□□ 0.59
SCRT1Q9BWW7 DUX4L23-201ENST00000615195 1269 ntBASIC18.73■□□□□ 0.59
SCRT1Q9BWW7 DUX4L24-201ENST00000617576 1269 ntBASIC18.73■□□□□ 0.59
SCRT1Q9BWW7 DUX4L22-201ENST00000618238 1269 ntBASIC18.73■□□□□ 0.59
SCRT1Q9BWW7 DUX4L20-201ENST00000619712 1269 ntBASIC18.73■□□□□ 0.59
SCRT1Q9BWW7 DUX4L21-201ENST00000622058 1269 ntBASIC18.73■□□□□ 0.59
SCRT1Q9BWW7 DUX4L10-201ENST00000622460 1267 ntBASIC18.73■□□□□ 0.59
SCRT1Q9BWW7 DUX4L25-201ENST00000624915 1269 ntBASIC18.73■□□□□ 0.59
SCRT1Q9BWW7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.73■□□□□ 0.59
SCRT1Q9BWW7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.73■□□□□ 0.59
SCRT1Q9BWW7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCRT1Q9BWW7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCRT1Q9BWW7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.72■□□□□ 0.59
SCRT1Q9BWW7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCRT1Q9BWW7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCRT1Q9BWW7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCRT1Q9BWW7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.72■□□□□ 0.59
SCRT1Q9BWW7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.72■□□□□ 0.59
SCRT1Q9BWW7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
SCRT1Q9BWW7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCRT1Q9BWW7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCRT1Q9BWW7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCRT1Q9BWW7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCRT1Q9BWW7 MIR219A2-201ENST00000608502 1504 ntBASIC18.71■□□□□ 0.59
SCRT1Q9BWW7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SCRT1Q9BWW7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.71■□□□□ 0.59
SCRT1Q9BWW7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.71■□□□□ 0.59
SCRT1Q9BWW7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SCRT1Q9BWW7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SCRT1Q9BWW7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.71■□□□□ 0.59
SCRT1Q9BWW7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCRT1Q9BWW7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCRT1Q9BWW7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.7■□□□□ 0.58
SCRT1Q9BWW7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCRT1Q9BWW7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SCRT1Q9BWW7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCRT1Q9BWW7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
SCRT1Q9BWW7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCRT1Q9BWW7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.7■□□□□ 0.58
SCRT1Q9BWW7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCRT1Q9BWW7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCRT1Q9BWW7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCRT1Q9BWW7 AC008813.1-201ENST00000536597 885 ntBASIC18.7■□□□□ 0.58
SCRT1Q9BWW7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCRT1Q9BWW7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCRT1Q9BWW7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCRT1Q9BWW7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCRT1Q9BWW7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCRT1Q9BWW7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCRT1Q9BWW7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCRT1Q9BWW7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCRT1Q9BWW7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.69■□□□□ 0.58
SCRT1Q9BWW7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.69■□□□□ 0.58
SCRT1Q9BWW7 AC233723.2-201ENST00000623798 2106 ntBASIC18.69■□□□□ 0.58
SCRT1Q9BWW7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCRT1Q9BWW7 C1orf229-201ENST00000623686 2258 ntBASIC18.69■□□□□ 0.58
SCRT1Q9BWW7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCRT1Q9BWW7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SCRT1Q9BWW7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms