Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSBP3Q9BWW4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.54■□□□□ 0.72
SSBP3Q9BWW4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.54■□□□□ 0.72
SSBP3Q9BWW4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSBP3Q9BWW4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSBP3Q9BWW4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.54■□□□□ 0.72
SSBP3Q9BWW4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
SSBP3Q9BWW4 DUSP8P4-201ENST00000399538 1761 ntBASIC19.54■□□□□ 0.72
SSBP3Q9BWW4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSBP3Q9BWW4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSBP3Q9BWW4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.53■□□□□ 0.72
SSBP3Q9BWW4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.53■□□□□ 0.72
SSBP3Q9BWW4 AC145676.1-201ENST00000514988 2004 ntBASIC19.53■□□□□ 0.72
SSBP3Q9BWW4 AC091060.1-201ENST00000623524 1766 ntBASIC19.53■□□□□ 0.72
SSBP3Q9BWW4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SSBP3Q9BWW4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSBP3Q9BWW4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSBP3Q9BWW4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSBP3Q9BWW4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSBP3Q9BWW4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SSBP3Q9BWW4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSBP3Q9BWW4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SSBP3Q9BWW4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SSBP3Q9BWW4 GUSBP5-201ENST00000418136 578 ntBASIC19.52■□□□□ 0.72
SSBP3Q9BWW4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SSBP3Q9BWW4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.52■□□□□ 0.71
SSBP3Q9BWW4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SSBP3Q9BWW4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
SSBP3Q9BWW4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
SSBP3Q9BWW4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.51■□□□□ 0.71
SSBP3Q9BWW4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SSBP3Q9BWW4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSBP3Q9BWW4 MIR4281-201ENST00000580852 62 ntBASIC19.51■□□□□ 0.71
SSBP3Q9BWW4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.51■□□□□ 0.71
SSBP3Q9BWW4 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.51■□□□□ 0.71
SSBP3Q9BWW4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SSBP3Q9BWW4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSBP3Q9BWW4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSBP3Q9BWW4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SSBP3Q9BWW4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSBP3Q9BWW4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSBP3Q9BWW4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.5■□□□□ 0.71
SSBP3Q9BWW4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SSBP3Q9BWW4 AC137630.3-201ENST00000607245 391 ntBASIC19.5■□□□□ 0.71
SSBP3Q9BWW4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.5■□□□□ 0.71
SSBP3Q9BWW4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSBP3Q9BWW4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSBP3Q9BWW4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSBP3Q9BWW4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SSBP3Q9BWW4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SSBP3Q9BWW4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
SSBP3Q9BWW4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.49■□□□□ 0.71
SSBP3Q9BWW4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.49■□□□□ 0.71
SSBP3Q9BWW4 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SSBP3Q9BWW4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SSBP3Q9BWW4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SSBP3Q9BWW4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SSBP3Q9BWW4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.48■□□□□ 0.71
SSBP3Q9BWW4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SSBP3Q9BWW4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSBP3Q9BWW4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSBP3Q9BWW4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSBP3Q9BWW4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SSBP3Q9BWW4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
SSBP3Q9BWW4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.47■□□□□ 0.71
SSBP3Q9BWW4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.47■□□□□ 0.71
SSBP3Q9BWW4 MIR4787-201ENST00000607364 84 ntBASIC19.47■□□□□ 0.71
SSBP3Q9BWW4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSBP3Q9BWW4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SSBP3Q9BWW4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SSBP3Q9BWW4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSBP3Q9BWW4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
SSBP3Q9BWW4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.46■□□□□ 0.71
SSBP3Q9BWW4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.46■□□□□ 0.71
SSBP3Q9BWW4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSBP3Q9BWW4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSBP3Q9BWW4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSBP3Q9BWW4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.46■□□□□ 0.71
SSBP3Q9BWW4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.46■□□□□ 0.71
SSBP3Q9BWW4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.46■□□□□ 0.71
SSBP3Q9BWW4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SSBP3Q9BWW4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSBP3Q9BWW4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.45■□□□□ 0.7
SSBP3Q9BWW4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSBP3Q9BWW4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSBP3Q9BWW4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSBP3Q9BWW4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSBP3Q9BWW4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.45■□□□□ 0.7
SSBP3Q9BWW4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSBP3Q9BWW4 AC090877.2-201ENST00000558441 1738 ntBASIC19.45■□□□□ 0.7
SSBP3Q9BWW4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSBP3Q9BWW4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSBP3Q9BWW4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSBP3Q9BWW4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.44■□□□□ 0.7
SSBP3Q9BWW4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.44■□□□□ 0.7
SSBP3Q9BWW4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.44■□□□□ 0.7
SSBP3Q9BWW4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSBP3Q9BWW4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.44■□□□□ 0.7
SSBP3Q9BWW4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SSBP3Q9BWW4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms