Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.54■□□□□ 0.72
PCGF1Q9BSM1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCGF1Q9BSM1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCGF1Q9BSM1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCGF1Q9BSM1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.54■□□□□ 0.72
PCGF1Q9BSM1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PCGF1Q9BSM1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PCGF1Q9BSM1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCGF1Q9BSM1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCGF1Q9BSM1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCGF1Q9BSM1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
PCGF1Q9BSM1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCGF1Q9BSM1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCGF1Q9BSM1 AC009299.2-201ENST00000482477 511 ntBASIC19.53■□□□□ 0.72
PCGF1Q9BSM1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCGF1Q9BSM1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCGF1Q9BSM1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PCGF1Q9BSM1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
PCGF1Q9BSM1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.52■□□□□ 0.72
PCGF1Q9BSM1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCGF1Q9BSM1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.52■□□□□ 0.72
PCGF1Q9BSM1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCGF1Q9BSM1 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCGF1Q9BSM1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.52■□□□□ 0.72
PCGF1Q9BSM1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.52■□□□□ 0.72
PCGF1Q9BSM1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.52■□□□□ 0.72
PCGF1Q9BSM1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
PCGF1Q9BSM1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCGF1Q9BSM1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCGF1Q9BSM1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCGF1Q9BSM1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCGF1Q9BSM1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
PCGF1Q9BSM1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PCGF1Q9BSM1 AC022616.5-201ENST00000518796 181 ntBASIC19.51■□□□□ 0.71
PCGF1Q9BSM1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.51■□□□□ 0.71
PCGF1Q9BSM1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.51■□□□□ 0.71
PCGF1Q9BSM1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCGF1Q9BSM1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.51■□□□□ 0.71
PCGF1Q9BSM1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PCGF1Q9BSM1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCGF1Q9BSM1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCGF1Q9BSM1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCGF1Q9BSM1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCGF1Q9BSM1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCGF1Q9BSM1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PCGF1Q9BSM1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCGF1Q9BSM1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCGF1Q9BSM1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCGF1Q9BSM1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCGF1Q9BSM1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCGF1Q9BSM1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PCGF1Q9BSM1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.49■□□□□ 0.71
PCGF1Q9BSM1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.49■□□□□ 0.71
PCGF1Q9BSM1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCGF1Q9BSM1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCGF1Q9BSM1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCGF1Q9BSM1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.48■□□□□ 0.71
PCGF1Q9BSM1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PCGF1Q9BSM1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCGF1Q9BSM1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCGF1Q9BSM1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PCGF1Q9BSM1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.48■□□□□ 0.71
PCGF1Q9BSM1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCGF1Q9BSM1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PCGF1Q9BSM1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCGF1Q9BSM1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PCGF1Q9BSM1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCGF1Q9BSM1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.47■□□□□ 0.71
PCGF1Q9BSM1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.47■□□□□ 0.71
PCGF1Q9BSM1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCGF1Q9BSM1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCGF1Q9BSM1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCGF1Q9BSM1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PCGF1Q9BSM1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCGF1Q9BSM1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCGF1Q9BSM1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCGF1Q9BSM1 AC096887.2-201ENST00000623443 1957 ntBASIC19.46■□□□□ 0.71
PCGF1Q9BSM1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCGF1Q9BSM1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCGF1Q9BSM1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCGF1Q9BSM1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCGF1Q9BSM1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.46■□□□□ 0.71
PCGF1Q9BSM1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.46■□□□□ 0.71
PCGF1Q9BSM1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
PCGF1Q9BSM1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCGF1Q9BSM1 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCGF1Q9BSM1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCGF1Q9BSM1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.46■□□□□ 0.71
PCGF1Q9BSM1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.46■□□□□ 0.71
PCGF1Q9BSM1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCGF1Q9BSM1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.45■□□□□ 0.7
PCGF1Q9BSM1 THA1P-201ENST00000590384 1145 ntBASIC19.45■□□□□ 0.7
PCGF1Q9BSM1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCGF1Q9BSM1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCGF1Q9BSM1 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCGF1Q9BSM1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
PCGF1Q9BSM1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.45■□□□□ 0.7
PCGF1Q9BSM1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCGF1Q9BSM1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.44■□□□□ 0.7
PCGF1Q9BSM1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms