Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
FOXC2Q99958 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXC2Q99958 AL449106.1-201ENST00000608517 1980 ntBASIC19.9■□□□□ 0.78
FOXC2Q99958 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXC2Q99958 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.9■□□□□ 0.78
FOXC2Q99958 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.9■□□□□ 0.78
FOXC2Q99958 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.9■□□□□ 0.78
FOXC2Q99958 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
FOXC2Q99958 AC091305.1-201ENST00000479476 895 ntBASIC19.89■□□□□ 0.77
FOXC2Q99958 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.89■□□□□ 0.77
FOXC2Q99958 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.89■□□□□ 0.77
FOXC2Q99958 DUX4L19-201ENST00000557448 1267 ntBASIC19.89■□□□□ 0.77
FOXC2Q99958 AC087623.3-201ENST00000607047 1098 ntBASIC19.89■□□□□ 0.77
FOXC2Q99958 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FOXC2Q99958 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXC2Q99958 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
FOXC2Q99958 AC004448.1-201ENST00000458332 883 ntBASIC19.88■□□□□ 0.77
FOXC2Q99958 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.88■□□□□ 0.77
FOXC2Q99958 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXC2Q99958 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXC2Q99958 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXC2Q99958 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FOXC2Q99958 AP001330.3-201ENST00000520123 633 ntBASIC19.87■□□□□ 0.77
FOXC2Q99958 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.87■□□□□ 0.77
FOXC2Q99958 BX255925.1-201ENST00000566954 1854 ntBASIC19.87■□□□□ 0.77
FOXC2Q99958 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXC2Q99958 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXC2Q99958 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXC2Q99958 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXC2Q99958 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXC2Q99958 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.86■□□□□ 0.77
FOXC2Q99958 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.86■□□□□ 0.77
FOXC2Q99958 SNX5-217ENST00000606557 1087 ntBASIC19.86■□□□□ 0.77
FOXC2Q99958 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
FOXC2Q99958 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
FOXC2Q99958 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXC2Q99958 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXC2Q99958 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
FOXC2Q99958 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.85■□□□□ 0.77
FOXC2Q99958 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.85■□□□□ 0.77
FOXC2Q99958 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC19.84■□□□□ 0.77
FOXC2Q99958 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXC2Q99958 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXC2Q99958 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
FOXC2Q99958 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.83■□□□□ 0.77
FOXC2Q99958 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
FOXC2Q99958 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXC2Q99958 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.83■□□□□ 0.77
FOXC2Q99958 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.83■□□□□ 0.77
FOXC2Q99958 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
FOXC2Q99958 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
FOXC2Q99958 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
FOXC2Q99958 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
FOXC2Q99958 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXC2Q99958 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXC2Q99958 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.82■□□□□ 0.76
FOXC2Q99958 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXC2Q99958 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXC2Q99958 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
FOXC2Q99958 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
FOXC2Q99958 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FOXC2Q99958 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
FOXC2Q99958 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXC2Q99958 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FOXC2Q99958 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXC2Q99958 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
FOXC2Q99958 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.8■□□□□ 0.76
FOXC2Q99958 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
FOXC2Q99958 RARRES2P11-201ENST00000635158 484 ntBASIC19.8■□□□□ 0.76
FOXC2Q99958 RASA4CP-201ENST00000424092 1398 ntBASIC19.8■□□□□ 0.76
FOXC2Q99958 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXC2Q99958 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXC2Q99958 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXC2Q99958 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.79■□□□□ 0.76
FOXC2Q99958 AC090192.1-201ENST00000517740 490 ntBASIC19.79■□□□□ 0.76
FOXC2Q99958 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FOXC2Q99958 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXC2Q99958 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
FOXC2Q99958 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FOXC2Q99958 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXC2Q99958 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
FOXC2Q99958 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
FOXC2Q99958 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.78■□□□□ 0.76
FOXC2Q99958 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXC2Q99958 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.78■□□□□ 0.76
FOXC2Q99958 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXC2Q99958 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXC2Q99958 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.78■□□□□ 0.76
FOXC2Q99958 AC092171.4-201ENST00000609130 632 ntBASIC19.78■□□□□ 0.76
FOXC2Q99958 CA15P2-201ENST00000611168 834 ntBASIC19.78■□□□□ 0.76
FOXC2Q99958 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
FOXC2Q99958 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
FOXC2Q99958 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
FOXC2Q99958 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
FOXC2Q99958 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
FOXC2Q99958 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
FOXC2Q99958 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
FOXC2Q99958 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
FOXC2Q99958 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
FOXC2Q99958 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms